Job Description P06986 Confidence 99.96% Date Thu Jan 5 10:59:42 GMT 2012 Rank 91 Aligned Residues 336 % Identity 17% Template d1jf9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.00

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.														60	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	I	T	D	L	A	R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	.	.	.	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	V	I	E	N	Y
Query Conservation																																											.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.										.	.	.	.	.																						.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.										.	.	.	.	.
Template Sequence		F	S	V	D	K	.	V	R	A	D	F	P	V	L	S	.	.	.	.	.	R	E	V	N	G	L	P	L	A	Y	L	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A
Template Known Secondary structure							.				T		G	G	G	G	.	.	.	.	.				T	T								T	T	T																			T					S	S		S	S
Template Predicted Secondary structure							.										.	.	.	.	.
Template SS confidence
		3	.	.	.	.		.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		68	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																							.	.	.	.																	.	.	.	.
Query SS confidence								.																							.	.	.	.																	.	.	.	.
Query Sequence		A	Q	Y	A	G	V	.	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	.	.	.	.	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	.	.	.	.	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q
Query Conservation								.																							.	.	.	.																	.	.	.	.
Alig confidence								.																							.	.	.	.					.												.	.	.	.
Template Conservation																																							.
Template Sequence		S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	.	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E
Template Known Secondary structure					T	T		S		G	G	G					S	S																			T	T	.							T	T			G	G	G	T											T								B		T	T	S		B		G	G
Template Predicted Secondary structure																																							.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		139	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		G	I	S	D	K	L	.	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A
Query Conservation								.
Alig confidence								.																														.	.																												.	.	.	.	.	.
Template Conservation																																						.	.																												.	.	.	.	.	.
Template Sequence		T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	M	I	T	L	A	H	.	.	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	.	.	.	.	.	.	F	Y	V	F	S	G	H	K	L
Template Known Secondary structure		G							T	T								S	B		T	T	T			B												.	.		T	T								T	T	T	T	T	T	S								T		S	.	.	.	.	.	.						G	G	G	T
Template Predicted Secondary structure																																						.	.																												.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q
Template Known Secondary structure		T	S		S	S												T	T				S	S		S	S	S	S						T	T	T							T	T	G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.								.	.	.	330	.	.	.	.	.	.	.	.	.				340
Predicted Secondary structure																											.								.	.																						.	.	.	.	.	.	.														.	.	.
Query SS confidence																											.								.	.																						.	.	.	.	.	.	.														.	.	.
Query Sequence		A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	.	Y	I	L	A	R	F	K	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	.	.	.	.	.	.	.	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T
Query Conservation																											.								.	.																						.	.	.	.	.	.	.														.	.	.
Alig confidence																											.								.	.																						.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T
Template Known Secondary structure												T	T	S	T	T					S		T	T			S							T	T													T	T								T	T								T	T		S									T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	E	V	D	R	L	V	T	G	L	Q	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions