Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 26 Aligned Residues 328 % Identity 18% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.														50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.									.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.										.														.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.										.														.	.	.	.	.	.	.	.
Query Sequence		R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	L	N	R	Y	P	E	C	.	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	.	.	.	.	.	.	.	.	G	V	K	P	E	Q	V	L	V	S
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.										.														.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.										.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	K	N	P	N	G	V	I	Q	M	G	L	A	E	N	Q	L	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M	A
Template Known Secondary structure		S	S	S	S	T	T	S	B				S	S					S	S												T	T	S	S	T	T												T	T																	T	T	T		S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.
Predicted Secondary structure																																										.															.	.											.	.	.	.	.	.	.
Query SS confidence																																										.															.	.											.	.	.	.	.	.	.
Query Sequence		R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	.	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	.	.	D	L	Q	G	I	S	D	K	L	D	.	.	.	.	.	.	.	G	V	K	V	V	Y
Query Conservation																																										.															.	.											.	.	.	.	.	.	.
Alig confidence																				.																						.															.	.											.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		G	G	A	T	G	A	N	E	T	I	I	F	C	L	A	D	P	G	.	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	Q	L	I	P	I	H	C	E	S	S	N	N	F	K	I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N	I	K	V	K	G	L	I
Template Known Secondary structure																		T	T	.							S	S			T	T					T	T	T	T	T											T	T	T	T	T																	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.												.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	.	.	.	.	.	.	.	.	.	.	.	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A
Query Conservation																														.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	N	P	S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S	L	S	K	D	M	G	L	P
Template Known Secondary structure				S	S		T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S		T	T	S							S	T	T	T	S	S		G
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure												.																																	.	.
Query SS confidence												.																																	.	.
Query Sequence		G	L	R	C	G	F	T	L	A	N	.	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	.	.	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E
Query Conservation												.																																	.	.
Alig confidence												.																																	.	.																											.
Template Conservation																																																																									.
Template Sequence		G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L	G	K	R	H	K	H	F	T	N	G	L	E	V	V	G	.	I	K	C	L	K	N	N	A
Template Known Secondary structure		G	G								S													T	T	S														T	T																														T	T	.			B				S	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.
		297	.	.	300	.	.	.	.	.										.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.													.												.												.	.
Query SS confidence											.	.	.	.	.	.	.	.	.													.												.												.	.
Query Sequence		T	N	Y	I	L	A	R	F	K	.	.	.	.	.	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	.	G	I	I	L	R	D	Q	N	K	Q	P	.	S	L	S	G	C	L	R	I	T	V	G	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation											.	.	.	.	.	.	.	.	.													.												.												.	.
Alig confidence											.	.	.	.	.	.	.	.	.													.												.												.	.
Template Conservation
Template Sequence		G	L	F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E	C	Q	E	P	G	W	F	R	V	C	F	A	N	M	D	D	G	T	V	D	I	A	L	A	R	I	R	R
Template Known Secondary structure		S	S							G	G	G		S	S	S	S														T	S							G	G	G	G	T		S	S	S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions