Job Description P06986 Confidence 99.95% Date Thu Jan 5 10:59:42 GMT 2012 Rank 112 Aligned Residues 327 % Identity 17% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		16	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure										.	.	.																																							.	.	.	.	.	.	.														.
Query SS confidence										.	.	.																																							.	.	.	.	.	.	.														.
Query Sequence		N	L	T	P	Y	Q	S	A	.	.	.	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	P	K	.	.	.	.	.	.	.	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	.	P	E	Q	V	L	V	S	R	G	A
Query Conservation										.	.	.																																							.	.	.	.	.	.	.														.
Alig confidence										.	.	.															.	.																							.	.	.	.	.	.	.														.
Template Conservation																											.	.
Template Sequence		K	L	L	V	T	P	P	K	A	L	L	K	P	L	S	I	P	N	Q	L	L	L	G	P	G	.	.	P	S	N	L	P	P	R	I	M	A	A	G	G	L	Q	M	I	G	S	M	S	K	D	M	Y	Q	I	M	D	E	I	K	E	G	I	Q	Y	V	F	Q	T	R	N	P	L	T	L	V	I	S	G	S	G
Template Known Secondary structure				S	S				G	G	G	G	S											S	S	S	.	.													T						T	T	S																			T				S						S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	.	.	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L
Query Conservation																																																															.	.
Alig confidence																	.																																														.	.
Template Conservation																	.
Template Sequence		H	C	A	L	E	A	A	L	V	N	V	L	E	P	G	.	D	S	F	L	V	G	A	N	G	I	W	G	Q	R	A	V	D	I	G	E	R	I	G	V	H	P	M	T	K	D	P	G	G	H	Y	T	L	Q	E	V	E	E	G	L	A	Q	H	K	P	V	L	L	F	L	T	H	G	E	S	S	T	G	V	L
Template Known Secondary structure															S	S	.							B	S	S																B			B			T	T																		S						S			T	T	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	.	.
Query Conservation																																																																																.	.
Alig confidence													.	.														.	.	.	.																										.																							.	.
Template Conservation													.	.														.	.	.	.																										.
Template Sequence		Q	P	L	D	G	F	G	E	L	C	H	.	.	R	Y	K	C	L	L	L	V	D	S	V	A	S	.	.	.	.	L	G	G	T	P	L	Y	M	D	R	Q	G	I	D	I	L	Y	S	G	S	Q	K	A	L	N	.	A	P	P	G	T	S	L	I	S	F	S	D	K	A	K	K	K	M	Y	S	R	K	T	K
Template Known Secondary structure					T	T							.	.	T	T	T								T	T	T	.	.	.	.	T	T	T	S				T	T	T	T	T		S						S	S	S	T	T		.			T	T															T	T		S	S
Template Predicted Secondary structure													.	.														.	.	.	.																										.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
																									241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Template Conservation
Template Sequence		P	F	S	F	Y	L	D	I	K	W	L	A	N	F	W	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V	I	S	L	Y	S	L	R	E	S	L	A	L	I	A	E	Q	G	L	E	N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	G	L	Q	L	F	V	K	D	P	A	L
Template Known Secondary structure			S		S	T	T									T	T		S	S	S						S																																												T			B	S	S		S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
				297	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.										.	.	.													.																					.			.	.	.
Query SS confidence		.	.										.	.	.													.																					.			.	.	.
Query Sequence		.	.	T	N	Y	I	L	A	R	F	K	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	.	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	.	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation		.	.										.	.	.													.																					.			.	.	.
Alig confidence		.	.										.	.	.													.											.										.			.	.	.
Template Conservation																																							.
Template Sequence		R	L	P	T	V	T	T	V	A	V	P	A	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	G	G	L	G	P	.	S	T	G	K	V	L	R	I	G	L	L	G	C	N	A	T	R	E	N	V	D	R	V	T	E	A	L	R	A
Template Known Secondary structure		B		T	T								T	T																							G	G	.	G	T	T	T								G	G	G		S
Template Predicted Secondary structure																																							.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions