 |
Job Description | P06986 | Confidence | 23.83% | Date | Thu Jan 5 10:59:42 GMT 2012 |
Rank | 276 | Aligned Residues | 105 |
% Identity | 12% | Template | d1gl9b1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Helicase-like "domain" of reverse gyrase
|
Resolution | 3.2 |
|
 |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | G | A | D | E | G | I | E | L | L | I | R | A | F | C | E | P | G | K | D | A | I | L | Y | C | P | P | T | Y | G | M | Y | S | V | S | A | E | T | I | G | V | E | C | R | T | V | P | T | L | D | N | W | Q | L | D | L | Q | G | I | S | D | K | L | D | G | V | K | V | V | Y | V | C | S | P | N | N | P | T | G |
Query Conservation |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |   |   |   |
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
G | V | G | K | T | S | F | G | L | A | M | S | L | F | L | A | L | K | G | . |
K | R | C | Y | V | I | F | P | T | S | L | L | V | I | Q | A | A | E | T | I | . |
R | K | Y | A | E | K | A | G | V | G | T | E | N | L | I | G | Y | Y | H | G | R | I | P | K | R | E | K | E | N | F | M | Q | N | L | R | N | F | K | I |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . |
|
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | T | T | T |
|
|
|
| T | T | T |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  | T | T | T | T | S |
| S |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | I | N | P | Q | D | F | R | T | L | L | E | L | T | R | G | K | A | I | V | V | A | D | E | A | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
Template Sequence |   |
V | I | T | T | T | Q | F | L | S | K | H | Y | R | E | L | G | H | F | D | F | I | F | V | D | D | V | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
|
|
| S |  |  |  |  | S |
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|