Job Description P06986 Confidence 99.92% Date Thu Jan 5 10:59:42 GMT 2012 Rank 138 Aligned Residues 339 % Identity 15% Template d1c7ga_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.		.
Query SS confidence																																														.	.	.		.
Query Sequence		R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	R	.	.	.	Y	.	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E
Query Conservation																																														.	.	.		.
Alig confidence																																														.	.	.		.																				.	.
Template Conservation																																																																						.	.
Template Sequence		R	V	K	K	M	Q	E	A	G	Y	N	T	F	L	L	N	S	K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	K	Q	W	A	G	M	M	I	G	D	E	A	Y	A	G	S	E	N	F	Y	H	L	E	K	T	V	K	E	L	F	G	F	K	.	.	H	I	V	P	T	H	Q	G	R	G
Template Known Secondary structure									T	T	T		G	G	G	S		G	G	G		S				S		S	S	S												T	T	S					S	S	S																		S	.	.						S	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.											.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	.	.	.	.	.	.	.	.	.	.	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	.	.	.	.	.	V	Y
Query Conservation																																																.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence															.						.																											.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation															.						.
Template Sequence		A	E	N	L	L	S	Q	L	A	I	K	P	G	.	Q	Y	V	A	G	.	N	M	Y	F	T	T	T	R	F	H	Q	E	K	N	G	A	T	F	V	D	I	V	R	D	E	A	H	D	A	S	L	N	L	P	F	K	G	D	I	D	L	N	K	L	A	T	L	I	K	E	K	G	A	E	N	I	A	Y	I	C
Template Known Secondary structure													T	T	.						.	S	S												T	T							B		G	G	G	G		T	T				S		T	T		B														G	G	G
Template Predicted Secondary structure															.						.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.												190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																						.										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																						.										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	C	S	P	N	N	P	T	.	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	.	V	V	A	D	E	A	Y	I	E	.	.	.	.	.	.	.	.	.	.	.	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L
Query Conservation										.																						.										.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																						.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	H	E	M	A	S	T	Y	G	I	K	I	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	A	G	Y	E	N	V	S	I	K	D	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C
Template Known Secondary structure				S	S	B	T	T	T	T	S	B																		T								T	T												S	T	T		T	T	S											T	T		S						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.						.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	.	.	.	.	.	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																																												.
Template Conservation																																																																											.
Template Sequence		L	V	N	I	G	G	F	L	C	M	N	D	E	E	M	F	S	A	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	R	E	A	.	G	V	P	I	V	E
Template Known Secondary structure				S	S							S																T			T	T	T	T	T																	T																						T	.	T			B		S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.												.	.	.	310	.	.	.	.	.	.	.		.	.	320	.													.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.												.					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.												.					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		D	S	E	T	N	Y	I	L	A	R	F	K	A	.	.	.	.	.	.	.	.	.	.	.	S	S	A	V	F	K	S	L	W	D	Q	.	G	I	I	L	.	.	.	.	.	.	.	.	.	.	.	.	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	.	T	R	E	E	S	Q
Query Conservation															.	.	.	.	.	.	.	.	.	.	.												.					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.												.					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		P	T	G	G	H	A	V	F	L	D	A	R	R	F	C	P	H	L	T	Q	D	Q	F	P	A	Q	S	L	A	A	S	I	Y	M	E	T	G	V	R	S	M	E	R	G	I	V	S	A	G	R	S	K	E	T	G	E	N	H	R	P	K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D
Template Known Secondary structure		S			S	S											T	T	S		G	G	G															S							S						B		S	S	S			B				S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	D	A	L	R	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	A	D	G	I	I	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions