Job Description P06986 Confidence 99.89% Date Thu Jan 5 10:59:42 GMT 2012 Rank 159 Aligned Residues 306 % Identity 11% Template d1bjna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	.	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	.	.	V	L	V	S	R	G	A	D	E	G	I	E	L
Query Conservation																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		Q	I	F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A
Template Known Secondary structure								S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		T	T	S																			T			T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																																				.
Query SS confidence																						.	.																																				.
Query Sequence		L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	.	.	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	.	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D
Query Conservation																						.	.																																				.
Alig confidence											.											.	.																																				.
Template Conservation											.
Template Sequence		V	P	L	N	I	L	G	D	K	.	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E
Template Known Secondary structure								T	T		.								S	S											T	T	T	S												T	T							G	G	G					S	S		S						S			T	T	T	T
Template Predicted Secondary structure											.
Template SS confidence
		83	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence						.	.	.	.																						.	.	.	.	.	.	.																			.	.																					.	.	.	.
Template Conservation						.	.	.	.																						.	.	.	.	.	.	.																			.	.
Template Sequence		T	P	D	F	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	.	.	.	.	.	.	.	S	R	Y	G	V	I	Y	A	G	A	Q	N	I	G	P	A	G	L	.	.	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S
Template Known Secondary structure						.	.	.	.		T	T								T	T	T	T	T	S	S				G	.	.	.	.	.	.	.	G	G		S										S	S	T	T		.	.							G	G	G		S				T	T	S		G	G	G
Template Predicted Secondary structure						.	.	.	.																						.	.	.	.	.	.	.																			.	.
Template SS confidence
		162	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
												244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																					.																																		.	.	.											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																					.																																		.	.	.											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	.	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	.	.	.	T	N	Y	I	L	A	R	F	K	A	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.																					.																																		.	.	.											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.																																		.	.	.											.	.	.
Template Conservation
Template Sequence		I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	R	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L
Template Known Secondary structure						T	T	T		S	S																				T	T																								S	S					B		G	G	G	B		S	S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Query Conservation																																			.	.	.
Alig confidence																					.	.	.												.	.	.
Template Conservation																					.	.	.
Template Sequence		D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	.	.	.	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V
Template Known Secondary structure												T	T					B			.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions