Job Description P06986 Confidence 99.84% Date Thu Jan 5 10:59:42 GMT 2012 Rank 181 Aligned Residues 341 % Identity 15% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.				.
Query SS confidence																																												.	.	.				.
Query Sequence		R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	.	.	.	N	R	Y	.	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E
Query Conservation																																												.	.	.				.
Alig confidence																																												.	.	.				.																				.	.
Template Conservation																																																																						.	.
Template Sequence		R	E	A	A	L	K	E	A	G	Y	N	P	F	L	L	P	S	S	A	V	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	T	G	D	E	A	Y	A	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	Y	D	.	.	Y	I	I	P	A	H	Q	G	R	G
Template Known Secondary structure									T	T	S		G	G	G	S		G	G	G		S				S		S	S	S														T					S	S	S																			.	.						S	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.
		87	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence													.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		G	I	E	L	L	I	R	A	F	C	E	.	.	.	.	.	.	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	.	.	.	.	.	.	.	.	.	.	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	.	.	.	.
Query Conservation													.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence													.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		A	E	N	I	L	F	P	V	L	L	K	Y	K	Q	K	E	G	K	A	K	N	P	V	F	I	S	N	F	H	F	D	T	T	A	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N	I	A	Q	H	G	A	D
Template Known Secondary structure																	T	T			S	S						S	S												T	T							B		G	G	G	G		T	T	S			T	T	T	T		B														G	G
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
			147	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.												.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.														.																						.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.														.																						.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	V	K	V	V	Y	V	C	S	P	N	N	P	T	.	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	.	V	V	A	D	E	A	Y	I	.	.	.	.	.	.	.	.	.	.	.	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L
Query Conservation		.														.																						.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.														.																						.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	V	A	I	V	S	T	V	T	C	N	S	A	G	G	Q	P	V	S	M	S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A	L	T	M
Template Known Secondary structure		G								S	S	B	T	T	T	T	S	B																		T								T	T													G	G	G	T	T											G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	.	.	.	.	.	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.																																														.
Template Conservation																																																																																	.
Template Sequence		S	A	K	D	P	L	L	N	I	G	G	L	V	A	I	R	D	N	E	E	I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	T	Y	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G	D	R	L	R	E	A	.
Template Known Secondary structure									S	S							S	S																T		S	T	T	T	T	T																T	T																						T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.													.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.													.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		G	I	P	I	Q	Y	P	T	G	G	H	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	M	E	F	M	R	L	T	I	A	R	R	V	Y
Template Known Secondary structure		T			B		S	S			S	S						S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions