Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 74 Aligned Residues 339 % Identity 18% Template d1ajsa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.60

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		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.		.	60	.	.	.	.
Predicted Secondary structure							.																																	.	.	.	.																.	.	.	.	.	.	.	.	.	.							.
Query SS confidence							.																																	.	.	.	.																.	.	.	.	.	.	.	.	.	.							.
Query Sequence		M	S	T	V	T	.	I	T	D	L	A	R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	.	.	.	.	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	.	.	.	.	.	.	.	.	.	.	N	R	Y	P	E	C	.	Q	P	K	A	V	I
Query Conservation							.																																	.	.	.	.																.	.	.	.	.	.	.	.	.	.							.
Alig confidence							.															.	.																	.	.	.	.																.	.	.	.	.	.	.	.	.	.							.
Template Conservation																						.	.
Template Sequence		P	S	V	F	A	E	V	P	Q	A	Q	P	V	L	V	F	K	L	I	A	.	.	D	F	R	E	D	P	D	P	R	K	V	N	L	G	V	G	A	Y	R	T	D	D	C	Q	P	W	V	L	P	V	V	R	K	V	E	Q	R	I	A	N	N	S	S	L	N	H	E	Y	L	P	I	L	G	L	A	E	F	R
Template Known Secondary structure				T	T	T	T															.	.				T				T	T						S						T	T	S																	T		T	T								T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		65	.	.	.	.	70	.							.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.								.	.																		.	.	.	.	.	.	.																											.	.	.
Query SS confidence									.	.	.	.	.	.								.	.																		.	.	.	.	.	.	.																											.	.	.
Query Sequence		E	N	Y	A	Q	Y	A	.	.	.	.	.	.	G	V	K	P	E	Q	V	.	.	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	.	.	.	.	.	.	.	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	.	.	.	V	E	C	R	T
Query Conservation									.	.	.	.	.	.								.	.																		.	.	.	.	.	.	.																											.	.	.
Alig confidence									.	.	.	.	.	.								.	.																		.	.	.	.	.	.	.					.																						.	.	.
Template Conservation																																																				.
Template Sequence		T	C	A	S	R	L	A	L	G	D	D	S	P	A	L	Q	E	K	R	V	G	G	V	Q	S	L	G	G	T	G	A	L	R	I	G	A	E	F	L	A	R	W	Y	N	G	T	N	N	K	D	.	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	G	V	F	T	T	A	G	F	K	D	I	R	S	Y	R
Template Known Secondary structure											T	T						T	T																									S	S	S	S	S				.	S							S			T									T	T		S
Template Predicted Secondary structure																																																				.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.
Predicted Secondary structure																				.	.	.	.																																				.																.	.	.	.	.	.
Query SS confidence																				.	.	.	.																																				.																.	.	.	.	.	.
Query Sequence		V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	.	.	.	.	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	.	.	.	.	.	.	S
Query Conservation																				.	.	.	.																																				.																.	.	.	.	.	.
Alig confidence																				.	.	.	.																																				.																.	.	.	.	.	.
Template Conservation
Template Sequence		Y	W	D	T	E	K	R	G	L	D	L	Q	G	F	L	S	D	L	E	N	A	P	E	F	S	I	F	V	L	H	A	C	A	H	N	P	T	G	T	D	P	T	P	E	Q	W	K	Q	I	A	S	V	M	K	R	R	F	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	N	L	E	K	D	A	W	A
Template Known Secondary structure					T	T	T	T														S		T	T							S	S	S		T	T	T																				T								S		T	T	T	T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.										.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	.	.	.	.	.	.	.	.	.	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		I	R	Y	F	V	S	E	G	F	E	L	F	C	A	Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L	T	V	V	A	K	E	P	D	S	I	L	R	V	L	S	Q	M	Q	K	I	V	R	V	T	W	S	N	P	P	A	Q	G	A	R	I	V	A	R	T	L	S	D	P	E	L	F	H	E	W
Template Known Secondary structure								T	T										T	T	T	S			G	G	G										S	S																	T	T	T	S	S			S												S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	.	.	.	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V
Query Conservation																													.	.	.
Alig confidence																													.	.	.																		.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																				.	.	.	.	.	.	.	.	.
Template Sequence		T	G	N	V	K	T	M	A	D	R	I	L	S	M	R	S	E	L	R	A	R	L	E	A	L	K	T	P	G	T	W	N	H	I	T	D	Q	I	G	M	F	S	F	T	G	L	N	.	P	K	Q	V	E	Y	L	I	N	Q	K	H	I	Y	L	L	P	S	G	.	.	.	.	.	.	.	.	.	R	I	N	M
Template Known Secondary structure																										T	T		S	S										S	S								.										T	T						T	T	S	.	.	.	.	.	.	.	.	.				G
Template Predicted Secondary structure																																																	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.										.	.	.	.
		339			340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		G	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		C	G	L	T	T	K	N	L	D	Y	V	A	T	S	I	H
Template Known Secondary structure		G	G			T	T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions