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Job DescriptionP06986
Confidence99.93%DateThu Jan 5 10:59:42 GMT 2012
Rank131Aligned Residues315
% Identity12%Templatec3uwcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VWLNANEYPTAVEFQLTQQTL. . . . . NRY. PECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAF. CEPGKDAIL
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Template Sequence  VPYSYLERQFADIEPYLNDLREFIKTADFTLGAELEKFEKRFAALHNAP. . HAIGVGTGTDALAXSFKXLNIGAG. DEVI
Template Known Secondary structure  B
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TSS
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   3......10.........20.........30.........40.........50. ........60.........70..... ....
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  YCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVAD
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Template Sequence  TCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAA. . ITDKTKAIXPVHYTGNIADXPALAKIAK. . KHNLHIVED
Template Known Secondary structure  SSS
TT

B
TTSSB
GGGTGGG..

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GGG



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   80.........90.........100.........110........ .120.........130.........140...... ...150.....
 
   185....190.........200.........210.........220.........230.........240. ........250.....
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Query Sequence  EAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIA. . . . . . . . . PYPLSTPVADIAAQ
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Template Sequence  ACQTILGRINDK. FVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRXDTIQA
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TT
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   156...160....... ..170.........180.........190.........200.........210.........220.........230....
 
   256...260.........270.........280.........290....... ..300.........310.........320.........
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Query Sequence  ALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSET. . . . . . NYILARFKASSAVFKSLWDQGIILRDQNKQPS
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Template Sequence  VIANRLXNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAX
Template Known Secondary structure  GGGTGGGTTT




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SSTTTTB

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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   330.. ....... 340.........350....
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Query Sequence  LSG. . . . . . . . . . . . . . . . . . . . . . CLRITVG. . . TREESQRVIDALRAE
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Template Sequence  HLQPAAKSLGYQQGDFPXAEKHGEAVITLPAHPYLTEEEINYIIKKVREF
Template Known Secondary structure  GGSGGGGGG


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   315....320.........330.........340.........350.........360....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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