Job Description P06986 Confidence 99.87% Date Thu Jan 5 10:59:42 GMT 2012 Rank 173 Aligned Residues 318 % Identity 13% Template c3ruyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: crystal structure of the ornithine-oxo acid transaminase rocd from2 bacillus anthracis Resolution 2.65 Å

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		26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure														.	.								.											.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.								.											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	G	N	G	D	V	W	L	N	A	N	.	.	E	Y	P	T	A	V	E	.	F	Q	L	T	Q	Q	T	L	N	R	.	.	.	.	.	.	.	.	.	.	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I
Query Conservation														.	.								.											.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.								.											.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																														.	.
Template Sequence		P	E	G	N	R	Y	M	D	L	L	S	A	Y	S	A	V	N	Q	G	H	R	H	P	K	I	I	N	A	L	I	D	Q	A	N	R	V	T	L	T	S	R	A	F	H	S	D	Q	L	G	P	W	Y	E	K	V	A	K	L	T	N	.	.	K	E	M	V	L	P	M	N	T	G	A	E	A	V	E	T	A	I
Template Known Secondary structure		T	T							S	S					T		T	T		B	T												T	T	T		S				T	T	S			S	S													T	.	.		S						S	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		93	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		R	A	F	C	.	.	.	.	.	.	.	.	.	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	.	.	.	.	.	.	.	.	.	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S
Query Conservation						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	A	R	R	W	A	Y	D	V	K	K	V	E	A	N	R	A	E	I	I	V	C	E	D	N	F	H	G	R	T	M	G	A	V	S	M	S	S	N	E	E	Y	K	R	G	F	G	P	M	L	P	G	I	I	V	I	P	Y	G	D	L	E	A	L	K	A	A	I	T	P	N	T	A	A	F	I	L	E	P
Template Known Secondary structure											T	S				T	T								T	T					S	S					T	T		S		T	T	T	T	T	T			S			S	S						T	T											T	T								S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		155	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure								.																				.
Query SS confidence								.																				.
Query Sequence		P	N	N	P	T	G	.	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V
Query Conservation								.																				.
Alig confidence								.																				.																															.								.
Template Conservation																																																											.								.
Template Sequence		I	Q	G	E	A	G	I	N	I	P	P	A	G	F	L	K	E	A	L	E	V	C	K	K	E	N	V	L	F	V	A	D	E	I	Q	T	G	L	G	R	T	G	K	V	F	A	C	D	W	D	N	V	T	P	D	M	Y	.	I	L	G	A	L	G	G	.	G	V	F	P	I	S	C	A	A	A	N	R	D	I
Template Known Secondary structure		S	B	T	T	T	T	S	B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.					T	T	T	.	T	T	S
Template Predicted Secondary structure																																																											.								.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.		.	.	.	.	310
Predicted Secondary structure																																																																		.										.
Query SS confidence																																																																		.										.
Query Sequence		I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	.	T	N	Y	I	L	A	R	F	K	.	A	S	S	A	V
Query Conservation																																																																		.										.
Alig confidence																																		.																																.										.
Template Conservation																																		.
Template Sequence		L	G	V	F	E	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	A	V	S	I	A	A	L	E	V	L	E	E	.	E	K	L	T	E	R	S	L	Q	L	G	E	K	L	V	G	Q	L	K	E	I	D	N	P	M	I	T	E	V	R	G	K	G	L	F	I	G	I	E	L	N	E	P	A	R	P	Y
Template Known Secondary structure			T	T			T	T	S	S			S	S	T	T																		.	T	T																	T	T				T	T								T	T							S	S		S
Template Predicted Secondary structure																																		.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation																															.	.	.
Alig confidence															.	.	.	.	.												.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		C	E	Q	L	K	A	A	G	L	L	C	K	E	.	.	.	.	.	T	H	E	N	V	I	R	I	A	P	P	L	V	I	S	E	E	D	L	E	W	A	F	Q	K	I	K	A
Template Known Secondary structure									T						.	.	.	.	.		T	T	T								T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.						.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions