Job Description P06986 Confidence 99.91% Date Thu Jan 5 10:59:42 GMT 2012 Rank 146 Aligned Residues 290 % Identity 15% Template c3qi6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99 Resolution 1.91 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N
Query Conservation
Alig confidence																							.	.																									.
Template Conservation																							.	.																									.
Template Sequence		A	R	T	G	N	P	T	R	T	A	L	E	A	A	L	A	A	V	E	D	A	.	.	A	F	G	R	A	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	L	R	P	G	.	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G	W	N	V	E	Y	T	P	V	A
Template Known Secondary structure		T	T	T																T	T		.	.	S						S	S															T	T	.							T	T												T	G	G	G	G	T
Template Predicted Secondary structure																							.	.																									.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L
Query Conservation
Alig confidence																																											.	.																						.	.	.	.	.
Template Conservation																																											.	.																						.	.	.	.	.
Template Sequence		L	A	D	L	D	A	V	R	A	A	I	R	P	T	T	R	L	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	I	A	G	I	A	Q	L	G	A	.	.	D	S	S	A	K	V	L	V	D	N	T	F	A	S	P	A	L	Q	Q	P	L	.	.	.	.	.	S	L	G	A	D	V	V	L	H	S	T
Template Known Secondary structure		T	T											T	T								S	S		T	T	T															.	.		T	T								T	T	T		T	T	T			G	G	.	.	.	.	.	G	G	T		S
Template Predicted Secondary structure																																											.	.																						.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		T	Y	I	G	G	H	S	D	V	V	G	G	A	L	V	T	N	D	E	E	L	D	Q	S	F	A	F	L	Q	N	G	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	.	.	R	G	L	K	T	L	V	L	R	M	Q	R	H	S	E	N	A	A	A	V	A	E	F	L	A	E	H	P	A	I	S	T	V
Template Known Secondary structure					S		S	S										S																													.	.				T	T																					T		T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		293	.	.	.																		.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.															.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	Y	I	L	A	R	F	K	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	S	G	C	L	R	I	T
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	G	R	T	A	A	E	Q	L	C	A	K	T	N	I	F	I	L	A	E	S	L	G	S	V	E	S	L	I	E	H	P	S	A	M	T	G	S	Q	L	E	V	P	D	D	L	V	R	L	S
Template Known Secondary structure				T	T	S	T	T	S	T	T									S	S			S							T	T													S	S	S				S					S	S						T	T	T					S					T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		V	G	T	R	E	E	S	Q	R	V	I	D	A	L	.	R	A	E	Q
Query Conservation																.
Alig confidence					.											.
Template Conservation					.
Template Sequence		V	G	I	.	E	D	V	A	D	L	L	D	D	L	K	Q	A	L	G
Template Known Secondary structure				S	.	S
Template Predicted Secondary structure					.
Template SS confidence
		371	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions