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Job DescriptionP06986
Confidence99.62%DateThu Jan 5 10:59:42 GMT 2012
Rank230Aligned Residues324
% Identity14%Templatec3oksB_
PDB info PDB header:transferaseChain: B: PDB Molecule:4-aminobutyrate transaminase; PDBTitle: crystal structure of 4-aminobutyrate transaminase from mycobacterium2 smegmatis
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LGGNGDVWLNAN. . EYPTAVE. FQLTQQTLNR. . . . . . . . . . . YPECQPKAVIENYAQYAGVK. PEQVLVSRGADEGIEL
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Template Sequence  VDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVEN
Template Known Secondary structure  TTS
SST
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   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
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Query Sequence  LIRAFCE. PGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAIT
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   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
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Query Sequence  . LQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA. IVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSK
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Template Sequence  VIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAG.
Template Known Secondary structure  T
GGG
SSBTTTT
B


TTTT

TTTTTTTTSSSSGGGTTT


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   214.....220.........230.........240.........250.........260.........270.........280.........290..
 
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Query Sequence  AFALAGLRCGFTLANEEVINLLMKVI. . APYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV
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Template Sequence  . . IAGGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGD
Template Known Secondary structure  ..TTTTSS
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   294.....300.........310.........320.........330.........340.........350.........360.........370.
 
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Query Sequence  FDSETNYILARFKA. . . . . . . . . . SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG. . . TREESQRVIDAL. RAEQ
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Template Sequence  VRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLS. . . CGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLR
Template Known Secondary structure  TTBSTTS

B
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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