Job Description P06986 Confidence 99.94% Date Thu Jan 5 10:59:42 GMT 2012 Rank 124 Aligned Residues 286 % Identity 13% Template c3mafB_ PDB info PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) Resolution 2.97 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	.	.	.	.	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	.	.	.	.	.	.	.	.	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P
Query Conservation																				.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																			.	.	.	.	.	.	.	.				.
Template Conservation																																																					.
Template Sequence		A	E	V	V	A	M	T	A	H	M	L	G	G	D	A	A	G	G	T	V	C	G	T	V	T	S	G	G	T	E	S	L	L	L	A	M	K	T	Y	R	D	W	A	R	A	T	K	G	I	T	A	.	P	E	A	V	V	P	V	S	A	H	A	A	F	D	K	A	A	Q	Y	F	G	I	K	L	V	R	T	P
Template Known Secondary structure												T	T	T	T	T	T	T	S								S	S																							S	S	.							T	T	S		T										T
Template Predicted Secondary structure																																																					.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																		.																																																.	.	.	.	.	.
Query SS confidence																		.																																																.	.	.	.	.	.
Query Sequence		T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	.	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	.	.	.	.	.	.	P	Q	A	S	L	A	G	W	L	A
Query Conservation																		.																																																.	.	.	.	.	.
Alig confidence																		.																														.	.																	.	.	.	.	.	.
Template Conservation																																																.	.
Template Sequence		L	D	A	D	Y	R	A	D	V	A	A	M	R	E	A	I	T	P	N	T	V	V	V	A	G	S	A	P	G	Y	P	H	G	V	V	D	P	I	P	E	I	A	A	L	A	A	.	.	E	H	G	I	G	C	H	V	D	A	C	L	G	G	F	I	L	P	W	A	E	R	L	G	Y	P	V	P	P	F	D	F
Template Known Secondary structure		B		T	T	S	S	B											T	T								T	T		T	T	T															.	.			T								T	T	T	T	T	T						T	T	T							S	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.														.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	E	G	V	T	S	V	S	A	D	T	H	K	Y	G	Y	G	A	K	G	T	S	V	I	L	Y	R	R	P	D	L	L	H	Y	Q	Y	F	I	A	A	D	W	P	G	G	L	Y	F	S	P	T	F	A	G	S	R	P	G	A	L	S	A	T	A	W	A	A	M	L	S	L	G	E	E	G	Y	L	D	A
Template Known Secondary structure		T	S	T	T								T	T	T	T	T				S	S							S	S												S	S		T	T						S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.
Predicted Secondary structure																																							.																																			.	.	.	.
Query SS confidence																																							.																																			.	.	.	.
Query Sequence		V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	.	T	R	E	E
Query Conservation																																							.																																			.	.	.	.
Alig confidence																																							.																			.	.	.	.													.	.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		T	R	R	I	L	Q	A	A	D	R	L	K	A	G	V	R	A	I	P	S	L	K	I	L	G	D	P	L	W	V	I	A	V	A	S	D	E	L	N	I	Y	Q	V	M	E	E	M	A	G	R	G	W	R	L	N	G	.	.	.	.	L	H	R	P	P	A	F	H	V	A	L	T	L	R	H	T	E	P	G	V
Template Known Secondary structure																		T	S	T	T				S	S			S	S							S	S	S												T	T						.	.	.	.		T	T	T	T								G	G	G	S	S	T	T
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.					.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		344	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	R	V	I	D	A	L	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	R	F	L	A	D	L	Q	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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