Job Description P06986 Confidence 99.85% Date Thu Jan 5 10:59:42 GMT 2012 Rank 177 Aligned Residues 301 % Identity 12% Template c3m5uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni Resolution 2.15 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	.	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		F	S	A	G	P	S	T	L	P	L	E	I	L	E	Q	A	Q	K	E	L	C	D	Y	Q	G	R	G	Y	S	I	X	E	I	S	H	R	T	K	V	F	E	E	V	H	F	G	A	Q	E	K	A	K	K	L	Y	E	L	N	D	D	Y	E	V	L	F	L	Q	G	G	A	S	L	Q	F	A	X	I	P	X	N
Template Known Secondary structure				S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		S	S	S																			T			T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	.	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L
Query Conservation																			.
Alig confidence																			.																																																								.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		L	A	L	N	G	V	C	E	Y	A	N	T	G	V	W	T	K	K	A	I	K	E	A	Q	I	L	G	V	N	V	K	T	V	A	S	S	E	E	S	N	F	D	H	I	P	R	V	E	F	S	D	N	A	D	Y	A	Y	I	C	S	N	N	T	I	Y	G	T	Q	Y	Q	N	Y	P	.	.	.	.	.	.	.
Template Known Secondary structure					S	S								S													T	T										T	T	T	T	S		S								T	T	S	S						S			T	T	T	T				S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																									.	.	.	.	.	.																	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																									.	.	.	.	.	.																	.	.
Template Sequence		.	K	T	K	T	P	L	I	V	D	A	S	S	D	F	F	S	R	K	V	D	F	S	N	I	.	.	.	.	.	.	A	L	F	Y	G	G	V	Q	K	N	A	G	I	S	G	L	.	.	S	C	I	F	I	R	K	D	X	L	E	R	S	K	N	K	Q	I	P	S	X	L	N	Y	L	T	H	A	E	N	Q
Template Known Secondary structure		.			S	S							G	G	G	T	T	S	S					T	T		.	.	.	.	.	.							T	T	T	T	S	S		T	T		.	.															T					G	G	G								T	T
Template Predicted Secondary structure		.																									.	.	.	.	.	.																	.	.
Template SS confidence
			159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
						244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.					.	.	.	310
Predicted Secondary structure		.	.	.	.																					.																																	.	.	.	.												.	.	.	.
Query SS confidence		.	.	.	.																					.																																	.	.	.	.												.	.	.	.
Query Sequence		.	.	.	.	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	.	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	.	.	.	.	E	T	N	Y	I	L	A	R	F	K	A	.	.	.	.	S	S	A	V
Query Conservation		.	.	.	.																					.																																	.	.	.	.												.	.	.	.
Alig confidence		.	.	.	.																					.																																	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		S	L	F	N	T	P	P	T	F	A	I	Y	X	F	N	L	E	X	D	W	L	L	N	Q	G	G	L	D	K	V	H	E	K	N	S	Q	K	A	T	X	L	Y	E	C	I	D	L	S	N	G	F	Y	K	G	H	A	D	K	K	D	R	S	L	X	N	V	S	F	N	I	A	K	N	K	D	L	E	P	L	F
Template Known Secondary structure		T		S	S																			T	T	T																						T	S	T	T	S				S	S		G	G	G	B		S	S							S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E	Q
Query Conservation																															.	.	.
Alig confidence																	.	.	.												.	.	.
Template Conservation																	.	.	.
Template Sequence		V	K	E	A	E	E	A	G	X	I	G	L	K	G	H	.	.	.	R	I	L	G	G	I	R	A	S	I	Y	N	A	L	N	L	D	Q	V	K	T	L	C	E	F	X	K	E	F	Q
Template Known Secondary structure								T	T					B			.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions