Job Description P06986 Confidence 99.95% Date Thu Jan 5 10:59:42 GMT 2012 Rank 105 Aligned Residues 320 % Identity 12% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																.	.	.												.	.	.	.	.	.	.	.						.	.	.	.	.
Query SS confidence																.	.	.												.	.	.	.	.	.	.	.						.	.	.	.	.
Query Sequence		G	N	G	D	V	W	L	N	A	N	E	Y	P	T	.	.	.	A	V	E	F	Q	L	T	Q	Q	T	L	.	.	.	.	.	.	.	.	N	R	Y	P	E	.	.	.	.	.	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L
Query Conservation																.	.	.												.	.	.	.	.	.	.	.						.	.	.	.	.
Alig confidence																.	.	.												.	.	.	.	.	.	.	.						.	.	.	.	.																.
Template Conservation																																																															.
Template Sequence		G	X	N	R	L	R	T	S	F	Q	Q	T	T	G	Q	I	S	G	H	G	K	R	N	V	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	Q	K	F	A	D	V	L	G	.	X	D	D	A	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L
Template Known Secondary structure												T		S			S	S	B	S	S												T	T	S		T	T						T	T			T	T												T	T	.		S						S
Template Predicted Secondary structure																																																															.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	.	.	.	.	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D
Query Conservation																									.	.	.	.
Alig confidence										.															.	.	.	.															.
Template Conservation										.																																	.
Template Sequence		R	I	W	S	D	E	T	D	.	N	R	T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	T	I	L	V	G	.	A	A	D	R	L	X	T	L	D	E	I	K	A	L	P	D	I	A	C	L	L	L	E	L	P	Q	R	E	I	G	G	V	A	P	A	F	S	E
Template Known Secondary structure									T	.								T	T						S	S	T	T						S	S							S	.		T	T	S												S		S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure										.																																	.
Template SS confidence
		79	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S
Query Conservation														.
Alig confidence														.																																	.	.
Template Conservation																																															.	.
Template Sequence		L	E	T	I	S	R	Y	C	R	E	R	G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	K	T	A	A	E	I	A	G	L	F	D	S	I	Y	I	.	.	S	F	Y	G	L	G	G	I	A	G	A	I	L	A	G	P	A	A	F	C	Q	T	A	R	I	W	K	R	R	Y	G	G	D
Template Known Secondary structure													T								T	T									T								T	T		S					.	.								S	S																						T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																.	.	.														.	.	.
Query SS confidence																																																.	.	.														.	.	.
Query Sequence		T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	.	.	.	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I
Query Conservation																																																.	.	.														.	.	.
Alig confidence														.																																		.	.	.														.	.	.
Template Conservation														.
Template Sequence		L	I	S	L	Y	P	Y	I	V	S	A	D	.	Y	Y	Y	E	L	R	K	D	R	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	T	T	P	E	V	P	V	S	N	X	F	H	L	H	F	D	G	Q	A	A	D	I	S	P	K	L	E	Q	V	Q	E	E	T	G	L	G
Template Known Secondary structure			S											.							T	T																			S	T	T					S	S	S		S	S	S								S
Template Predicted Secondary structure														.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.							340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	G	Y	L	V	D	K	D	G	Y	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q
Template Known Secondary structure		S		S						S	S								B						T	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions