Job Description P06986 Confidence 40.78% Date Thu Jan 5 10:59:42 GMT 2012 Rank 254 Aligned Residues 107 % Identity 18% Template c3lmyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-hexosaminidase subunit beta; PDBTitle: the crystal structure of beta-hexosaminidase b in complex with2 pyrimethamine Resolution 2.80 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.								.	.	.	.	.	.	.	.	110	.																				.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																													.	.	.					.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.					.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	.	.	.	P	G	K	D	.	.	.	.	.	.	.	A	I	L	Y	C	P	P	T	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	Y	S	V	S	A	E	T	I	G
Query Conservation																													.	.	.					.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.					.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	V	K	E	P	V	A	V	L	K	A	N	R	V	W	G	A	L	R	G	L	E	T	F	S	Q	L	V	Y	Q	D	S	Y	G	T	F	T	I	N	E	S	T	I	I	D	S	P	R	F	S	H	R	G	I	L	I	D	T	S	R	H	Y	L	P	V	K	I	I	L	K	T	L	D	A	M	A	F	N	K
Template Known Secondary structure						S	S							S	S																			T	T	S														S		S								S	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		F	N	V	L	H	W	H	I	V	D	D	Q	S	F	P	Y	Q	S	I	T	F	P	E	L	S	N	K	G	S	Y	S	.	.	.	.	.	.	L	S	H	V	Y	T	P	N	D	V	R	M	V	I	E	Y	A	R	L	R	G	I	R	V	L
Template Known Secondary structure											B	T	T	B			B			S	S									S	S	S	.	.	.	.	.	.	T	T	S		B														T	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions