Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 32 Aligned Residues 332 % Identity 19% Template c3l8aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans Resolution 1.54 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	.	.	.	.	.	.	.	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	.	.	.	.	.	.	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E
Query Conservation																																				.	.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.					.														.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		Y	K	W	K	T	S	E	N	N	P	E	L	L	Q	M	W	V	A	D	M	D	F	L	P	V	P	E	I	K	E	A	I	I	N	Y	G	R	E	H	I	F	G	Y	N	Y	.	F	N	D	D	L	Y	Q	A	V	I	D	W	E	R	K	E	H	D	Y	A	V	V	K	E	D	I	L	F	I	D	G	V	V	P
Template Known Secondary structure		T	T	T	G	G	G	T	T		T	T						S	S				S																			S	S				.																							G	G	G					S
Template Predicted Secondary structure																																															.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	.	.	.	.	.	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q
Query Conservation																																																	.	.	.	.	.
Alig confidence															.																																		.	.	.	.	.
Template Conservation															.
Template Sequence		A	I	S	I	A	L	Q	A	F	S	E	K	G	.	D	A	V	L	I	N	S	P	V	Y	Y	P	F	A	R	T	I	R	L	N	D	H	R	L	V	E	N	S	L	Q	I	I	N	G	R	F	E	I	D	F	E	Q	L	E	K	D	I	I	D	N	N	V	K	I	Y	L	L	C	S	P	H	N	P	G	G	R
Template Known Secondary structure											S		T		.								S												T	T												T	T																T	T								S	S	B	T	T	T	T	B
Template Predicted Secondary structure															.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																				.																									.	.	.	.	.
Query SS confidence																				.																									.	.	.	.	.
Query Sequence		L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	.	.	.	.	.	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L
Query Conservation																				.																									.	.	.	.	.
Alig confidence																				.																									.	.	.	.	.
Template Conservation
Template Sequence		V	W	D	N	D	D	L	I	K	I	A	E	L	C	K	K	H	G	V	I	L	V	S	D	E	I	H	Q	D	L	A	L	F	G	N	T	H	H	S	L	N	T	L	D	A	S	Y	K	D	F	T	I	I	L	S	S	A	T	K	T	F	N	I	A	G	T	K	N	S	F	A	I	I	Q	N	E	S	L	R	R
Template Known Secondary structure																			T								T	T	T	T		B		T	T						G	G	G	S		T	T	G	G	G	T							S					T		G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		236	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.
Predicted Secondary structure								.	.	.																																																																	.	.	.	.
Query SS confidence								.	.	.																																																																	.	.	.	.
Query Sequence		L	M	K	V	I	A	.	.	.	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	.	A	S	S
Query Conservation								.	.	.																																																																	.	.	.	.
Alig confidence								.	.	.																																																																	.	.	.	.
Template Conservation
Template Sequence		K	F	Q	Y	R	Q	L	A	N	N	Q	H	E	V	P	T	V	G	M	I	A	T	Q	A	A	F	Q	Y	G	K	P	W	L	E	E	L	K	T	V	I	E	G	N	I	K	L	V	I	K	E	L	E	A	K	T	K	I	K	V	M	E	P	E	G	T	Y	L	V	W	L	D	F	S	A	Y	A	I	A	Q	P
Template Known Secondary structure										T	T		S																																											S	S							S	B	S	S							G	G	G	T			T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		309	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure											.												.													.
Query SS confidence											.												.													.
Query Sequence		A	V	F	K	S	L	W	D	Q	.	G	I	I	L	R	D	Q	N	K	Q	P	.	S	L	S	G	C	L	R	I	T	V	G	T	.	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation											.												.													.
Alig confidence											.												.													.
Template Conservation
Template Sequence		Q	L	S	E	K	L	Q	N	E	A	K	V	V	L	N	D	G	A	H	F	G	K	E	G	K	Y	F	A	R	L	N	V	A	T	P	K	N	T	V	Q	E	A	L	S	R	I	I	S
Template Known Secondary structure										T	S							G	G	G	G		G	G	G	T	T								S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions