Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 21 Aligned Residues 341 % Identity 20% Template c3jtxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (np_283882.1) from neisseria2 meningitidis z2491 at 1.91 a resolution Resolution 1.91 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.										.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.							.															.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.							.															.	.	.
Query Sequence		R	E	N	V	R	N	L	T	P	Y	Q	S	A	.	.	.	.	.	.	.	.	.	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	.	.	.	.	.	.	L	N	R	Y	P	E	.	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.							.															.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.							.															.	.	.
Template Conservation
Template Sequence		N	T	L	L	K	Q	L	K	P	Y	P	F	A	R	L	H	E	A	X	Q	G	I	S	A	P	E	G	X	E	A	V	P	L	H	I	G	E	P	K	H	P	T	P	K	V	I	T	D	A	L	T	A	S	L	H	E	L	E	K	Y	P	L	T	A	G	L	P	E	L	R	Q	A	C	A	N	W	L	K	R	R
Template Known Secondary structure						T	T														T	T					T	T						T	T			S			S													T	G	G	G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				72	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.				.	.	.																								.	.	.																																					.	.
Query SS confidence		.	.				.	.	.																								.	.	.																																					.	.
Query Sequence		.	.	G	V	K	.	.	.	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	.	.	.	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	.	.	Q	L	D	L	Q	G	I	S
Query Conservation		.	.				.	.	.																								.	.	.																																					.	.
Alig confidence		.	.				.	.	.																								.	.	.			.																																		.	.
Template Conservation																																						.
Template Sequence		Y	D	G	L	T	V	D	A	D	N	E	I	L	P	V	L	G	S	R	E	A	L	F	S	F	V	Q	T	V	L	N	P	V	G	I	K	.	P	A	I	V	S	P	N	P	F	Y	Q	I	Y	E	G	A	T	L	L	G	G	G	E	I	H	F	A	N	C	P	A	P	S	F	N	P	D	W	R	S	I	S	E
Template Known Secondary structure		T	T	T					T	T	T	S					S	S																				.								S												T	T										T	T	T					G	G	G	S
Template Predicted Secondary structure																																						.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.								.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																								.																							.	.	.	.	.	.	.
Query SS confidence																																								.																							.	.	.	.	.	.	.
Query Sequence		D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	.	.	.	.	.	.	.	E	Y	P	H	L	A	I	L	R	T	L	S
Query Conservation																																								.																							.	.	.	.	.	.	.
Alig confidence																																								.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	W	K	R	T	K	L	V	F	V	C	S	P	N	N	P	S	G	S	V	L	D	L	D	G	W	K	E	V	F	D	L	Q	D	K	Y	G	F	I	I	A	S	D	E	C	Y	S	E	I	Y	F	D	G	N	K	P	L	G	C	L	Q	A	A	A	Q	L	G	R	S	R	Q	K	L	L	X	F	T	S	L
Template Known Secondary structure					T	T								S	S		T	T	T																												T	T	T	T			S	T	T													T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F
Query Conservation
Alig confidence																																																																														.	.
Template Conservation																																																																														.	.
Template Sequence		S	R	S	N	V	P	G	L	R	S	G	F	V	A	G	D	A	E	L	L	K	N	F	L	L	Y	R	T	Y	H	G	S	A	X	S	I	P	V	Q	R	A	S	I	A	A	W	D	D	E	Q	H	V	I	D	N	R	R	L	Y	Q	E	K	F	E	R	V	I	P	I	L	Q	Q	V	F	D	V	.	.	K	L
Template Known Secondary structure					S		G	G	G																							T																																								T	T	T	S			.	.
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320
		294	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.								.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure														.	.													.											.	.	.	.	.	.	.													.
Query SS confidence														.	.													.											.	.	.	.	.	.	.													.
Query Sequence		D	S	E	T	N	Y	I	L	A	R	F	K	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	.	G	I	I	L	R	D	Q	N	K	Q	.	.	.	.	.	.	.	P	S	L	S	G	C	L	R	I	T	V	G	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Query Conservation														.	.													.											.	.	.	.	.	.	.													.
Alig confidence														.	.													.											.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		P	D	A	S	F	Y	I	W	L	K	V	P	D	G	D	D	L	A	F	A	R	N	L	W	Q	K	A	A	I	Q	V	L	P	G	R	F	L	A	R	D	T	E	Q	G	N	P	G	E	G	Y	V	R	I	A	L	V	A	D	V	A	T	C	V	K	A	A	E	D	I	V	S	L
Template Known Secondary structure			S	S	S	S							T	T	S																				G	G	G	G	S			B	T	T	B		T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions