Job Description P06986 Confidence 99.96% Date Thu Jan 5 10:59:42 GMT 2012 Rank 86 Aligned Residues 313 % Identity 13% Template c3ffrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution Resolution 1.75 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60											.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																			.																	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																			.																	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	.	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	P	.	.	.	.	.	.	.	.	.	.	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	.	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F
Query Conservation																			.																	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																			.																	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		X	N	N	K	I	Y	F	T	P	G	P	S	E	L	Y	P	T	V	R	Q	H	X	I	T	A	L	D	E	K	I	G	V	I	S	H	R	S	K	K	F	E	E	V	Y	K	T	A	S	D	N	L	K	T	L	L	E	L	P	S	N	Y	E	V	L	F	L	A	S	A	T	E	I	W	E	R	I	I	Q	N	C
Template Known Secondary structure										S	S	S					T	T											T	T	T	T	T	S		T	T	S																		T	T			T	T							S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T
Query Conservation
Alig confidence						.																																														.																												.	.
Template Conservation						.																																														.																												.	.
Template Sequence		V	E	K	K	.	S	F	H	C	V	N	G	S	F	S	K	R	F	Y	E	F	A	G	E	L	G	R	E	A	Y	K	E	E	A	A	F	G	K	G	F	Y	P	A	D	I	T	V	P	A	D	.	A	E	I	I	C	L	T	H	N	E	T	S	S	G	V	S	X	P	V	E	D	I	N	T	F	R	D	.	.
Template Known Secondary structure			S	S		.							S													T	T										T	T					G	G	G					T	T	.								S			T	T	T	T									T	T	S	G	G	.	.
Template Predicted Secondary structure						.																																														.																												.	.
Template SS confidence
		81	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																									.	.																											.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																									.	.
Template Sequence		K	N	K	D	A	L	I	F	V	D	A	V	S	S	L	P	.	.	.	.	.	Y	P	K	F	D	W	T	K	I	D	S	V	F	F	S	V	Q	C	F	G	L	P	A	G	.	.	L	G	V	W	I	L	N	D	R	V	I	E	K	S	K	A	L	L	A	K	R	K	S	I	G	T	Y	H	T	I	P	S	X
Template Known Secondary structure		G	S	T	T	S							T	T	T	T	T	.	.	.	.	.	S	S				T	T	S		S													S		.	.																				T	T					S	T	T	S
Template Predicted Secondary structure																		.	.	.	.	.																									.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
																		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	.	.	.	.	.	N	Y	I	L	A	R	F	K	A	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	A	R	V	N	Q	T	P	E	T	P	N	A	X	N	I	F	L	L	G	K	V	T	G	D	X	L	Q	I	S	A	D	G	I	R	K	Q	T	E	E	K	A	A	L	I	N	T	Y	I	E	S	S	K	V	F	S	F	G	V	E	D	A	K	L	R	S	X	T	T	I	V	A	N	T	T	X	L	P
Template Known Secondary structure						T	T	T			S	S																																												S	S				S	S	S		G	G	G	B		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Query Conservation																																		.	.	.
Alig confidence																						.												.	.	.
Template Conservation																						.
Template Sequence		G	E	I	N	K	I	L	E	P	F	D	X	A	V	G	A	G	Y	G	S	.	K	K	E	T	Q	I	R	I	A	N	F	P	A	H	S	L	E	Q	V	H	K	L	V	Q	T	L	K
Template Known Secondary structure									G	G	G	T							S	G	G	.	G	T	T	T								T	T	S
Template Predicted Secondary structure																						.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions