Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 42 Aligned Residues 302 % Identity 20% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		52	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.														.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	R	Y	.	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A
Query Conservation						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																																																.
Template Sequence		R	N	Y	P	G	G	V	A	G	L	P	S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	.	P	K	X	I	V	T	V	P	G	Y	D	R	H	F	L	L	L
Template Known Secondary structure		T	S	S		S		T	T													T	T	S		G	G	G					S	S																T			T	T		S	S		G	G	G	G		.								S
Template Predicted Secondary structure																																																																.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																		.	.	.																										.										.
Query SS confidence																																		.	.	.																										.										.
Query Sequence		E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	.	.	.	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	.	T	R	G	K	A	I	V	V	A	.	D	E	A	Y	I	E	F	C	P
Query Conservation																																		.	.	.																										.										.
Alig confidence																																		.	.	.																										.										.
Template Conservation
Template Sequence		Q	T	L	G	F	E	L	L	T	V	D	X	Q	S	D	G	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A	D	D	A	Y	R	V	H	H	L
Template Known Secondary structure					T										T	T													S		T	T								S	S	S		T	T	T														T				S	S	T	T								T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		193	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																																											.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																																											.
Query Sequence		Q	A	S	L	A	G	W	L	A	E	Y	.	.	.	.	.	.	.	.	.	.	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	.
Query Conservation													.	.	.	.	.	.	.	.	.	.																																																											.
Alig confidence													.	.	.	.	.	.	.	.	.	.															.																																												.
Template Conservation																																					.
Template Sequence		V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	.	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	S	I	G	P	N	K	V	E	Q	A	R	H	V	K	F	L	T	E	Y
Template Known Secondary structure			S	S	S															T		T	T	S							S	T	T	T	S		.	S	S	S	S																					S		S																	S
Template Predicted Secondary structure																																					.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
						262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.	.																									.	.	.	.	.																					.	.
Query SS confidence		.	.	.	.																									.	.	.	.	.																					.	.
Query Sequence		.	.	.	.	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	.	.	.	.	.	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L
Query Conservation		.	.	.	.																									.	.	.	.	.																					.	.
Alig confidence		.	.	.	.																									.	.	.	.	.																					.	.
Template Conservation
Template Sequence		P	G	G	L	E	G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	K	G	G	Y	F	I	S	L	D	T	A	E	P	V	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L	T	P	A	G	A	T	Y	P	A
Template Known Secondary structure		T	T																													T	T	T	T	S	S							S	B	S	S							S	S	S												T	T						T	T	T	T	S	S	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
							331	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.
Predicted Secondary structure		.	.	.	.	.										.	.													.
Query SS confidence		.	.	.	.	.										.	.													.
Query Sequence		.	.	.	.	.	S	G	C	L	R	I	T	V	G	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	.	R	A	E	Q
Query Conservation		.	.	.	.	.										.	.													.
Alig confidence		.	.	.	.	.										.	.													.
Template Conservation
Template Sequence		G	Q	D	P	H	N	R	N	L	R	L	A	P	T	R	P	P	V	E	E	V	R	T	A	X	Q	V	V	A	A	C	I	R
Template Known Secondary structure		T			S	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions