Job Description P06986 Confidence 99.84% Date Thu Jan 5 10:59:42 GMT 2012 Rank 182 Aligned Residues 299 % Identity 20% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																						.	.	.	.											.	.	.
Query SS confidence																						.	.	.	.											.	.	.
Query Sequence		V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	.	.	.	.	L	N	R	Y	P	E	C	Q	P	K	.	.	.	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L
Query Conservation																						.	.	.	.											.	.	.
Alig confidence												.	.									.	.	.	.											.	.	.																							.																.
Template Conservation												.	.																																																.																.
Template Sequence		V	E	L	I	A	S	E	N	I	V	.	.	S	R	A	V	L	D	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	H	A	N	V	Q	P	H	S	G	.	A	Q	A	N	G	A	V	M	L	A	L	A	K	P	G	.	D	T	V	L
Template Known Secondary structure						T	T					.	.									T	S	G	G	G	S	S		T	T																	T	T		S							S	S		.														T	T	.
Template Predicted Secondary structure												.	.																																																.																.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	.	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A
Query Conservation																														.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.									.																																										.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Sequence		G	M	S	L	F	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	S	L	I	I	A	G	F	S	A	Y	P	R	K	L	D	F	A	R	F	R	A	I	A	D	.	.	S	V	G	A	K	L	M	V
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.					B		T	T	T		S	B															S							S			S	S													.	.		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template SS confidence
		122	.	.	.	.	.	.														.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V
Query Conservation
Alig confidence																					.														.	.																	.	.
Template Conservation																					.														.	.																	.	.
Template Sequence		D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	.	H	A	H	V	V	T	S	T	T	H	K	T	L	.	.	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	.	.	K	K	I	N	S	A	V	G	P	L	M	H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D
Template Known Secondary structure				T	T	T						T	T	S	S			G	G	G	.	T		S						S	S	G	G	G	.	.		S		S							S						.	.																									T	S
Template Predicted Secondary structure																					.														.	.																	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																												.	.	.	.																					.	.	.	.	.
Query SS confidence																																												.	.	.	.																					.	.	.	.	.
Query Sequence		A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	.	.	.	.	.	K	Q	P	S	L	S	G	C	L
Query Conservation																																												.	.	.	.																					.	.	.	.	.
Alig confidence																																												.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A	L	E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I
Template Known Secondary structure																								T	T				G	G	G	S		S	S	S							G	G	G	T													T	T									T	T		S	S		T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		335	.	.	.	.								340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.
Query Sequence		R	I	T	V	G	.	.	.	.	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Query Conservation							.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions