Job Description P06986 Confidence 99.82% Date Thu Jan 5 10:59:42 GMT 2012 Rank 187 Aligned Residues 295 % Identity 13% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.								.															.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.								.															.	.
Query Sequence		P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	.	Q	V	L	V	S	R	G	.	A	D	E	G	I	E	L	L	I	R	A	F	C	E	.	.	P	G	K
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.								.															.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.								.															.	.			.
Template Conservation																																																																																	.
Template Sequence		P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P	L	N	L	I	G	L	K	A	G	.
Template Known Secondary structure												T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S														G	G	G	S	T	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																															.
Query SS confidence														.	.																															.
Query Sequence		D	A	I	L	Y	C	P	P	T	Y	G	M	.	.	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	.	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G
Query Conservation														.	.																															.
Alig confidence														.	.																															.																							.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		R	C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.	.	.	.	.	.	.	.	F	I	P	D	V
Template Known Secondary structure										S											T	T	T	S						S				S	S	S		S				G	G	G					T	T		S						S			T	T	T	T				S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.
		178	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230													.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure					.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	I	.	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	N	L	L	M	K	V	I	A	P	Y	P
Query Conservation					.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																				.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	V	S	K	F	.	.	.	.	.	.	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V	L	E	Y	K	V	Q	A	G	N	S	S	L	Y	N	T
Template Known Secondary structure		T	T								T	T	T	T	T	S	S				G	G	G		.	.	.	.	.	.	S						G	G	G	T	T	S		T	T								T	T	S		S				T	T	S		G	G	G							T	T	T	T		S	S
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.								.	.	.	310	.	.
Predicted Secondary structure																					.																																	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence																					.																																	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	.	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	.	.	.	.	E	T	N	Y	I	L	A	R	F	K	A	.	.	.	.	.	.	.	S	S	A	V	F	K
Query Conservation																					.																																	.	.	.	.												.	.	.	.	.	.	.
Alig confidence																					.																																	.	.	.	.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I	G	N	A	K	G	D	D	A	L	E	K	R	F	L	D
Template Known Secondary structure																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Query Conservation																													.	.	.
Alig confidence															.	.	.												.	.	.
Template Conservation															.	.	.
Template Sequence		K	A	L	E	L	N	M	L	S	L	K	G	H	.	.	.	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K
Template Known Secondary structure						T	T			S		B			.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions