Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 16 Aligned Residues 342 % Identity 17% Template c3e2yB_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:kynurenine-oxoglutarate transaminase 3; PDBTitle: crystal structure of mouse kynurenine aminotransferase iii in complex2 with glutamine Resolution 2.26 Å

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		12	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.
Predicted Secondary structure											.	.	.																																.	.	.	.	.	.	.	.					.																	.	.	.	.	.	.
Query SS confidence											.	.	.																																.	.	.	.	.	.	.	.					.																	.	.	.	.	.	.
Query Sequence		E	N	V	R	N	L	T	P	Y	.	.	.	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	.	.	.	.	.	.	.	.	L	N	R	Y	.	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	.	.	.	.	.	.	G	V
Query Conservation											.	.	.																																.	.	.	.	.	.	.	.					.																	.	.	.	.	.	.
Alig confidence											.	.	.																																.	.	.	.	.	.	.	.					.																	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	I	E	G	L	D	S	N	V	W	V	E	F	T	K	L	A	A	D	P	S	V	V	N	L	G	Q	G	F	P	D	I	S	P	P	S	Y	V	K	E	E	L	S	K	A	A	F	I	D	N	M	N	Q	Y	T	R	G	F	G	H	P	A	L	V	K	A	L	S	C	L	Y	G	K	I	Y	Q	R	Q	I
Template Known Secondary structure		G	G	G	T	T									T		S	T	T		S	T	T					S	S					S															T	S	G	G	G	G	S				T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		74	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.												.	.	.	.	.	.	140	.
Predicted Secondary structure				.																																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	.	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	.	.	.	.	.	.	.	.	.	.	.	Q	L	D	L	Q	G	I	S
Query Conservation				.																																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																									.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		D	P	N	E	E	I	L	V	A	V	G	A	Y	G	S	L	F	N	S	I	Q	G	L	V	D	P	G	.	D	E	V	I	I	M	V	P	F	Y	D	C	Y	E	P	M	V	R	M	A	G	A	V	P	V	F	I	P	L	R	S	K	P	T	D	G	M	K	W	T	S	S	D	W	T	F	D	P	R	E	L	E
Template Known Secondary structure			T	T	T	S					S																T	T	.								S			T	T								T	T															S	S			B	G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		142	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure					.																																				.																.	.	.	.
Query SS confidence					.																																				.																.	.	.	.
Query Sequence		D	K	L	.	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	.	.	.	.	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A
Query Conservation					.																																				.																.	.	.	.
Alig confidence					.																																				.																.	.	.	.
Template Conservation
Template Sequence		S	K	F	S	S	K	T	K	A	I	I	L	N	T	P	H	N	P	L	G	K	V	Y	T	R	Q	E	L	Q	V	I	A	D	L	C	V	K	H	D	T	L	C	I	S	D	E	V	Y	E	W	L	V	Y	T	G	H	T	H	V	K	I	A	T	L	P	G	M	W	E	R	T	I	T	I	G	S	A	G	K	T
Template Known Secondary structure						T	T								S	S		T	T	T																				T								T	T	T	T		B		T	T						G	G	G	S	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.									.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.
Query Sequence		F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	.	.	.	.	.	.	.	.	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P
Query Conservation																																																	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	V	T	G	W	K	L	G	W	S	I	G	P	A	H	L	I	K	H	L	Q	T	V	Q	Q	N	S	F	Y	T	C	A	T	P	L	Q	A	A	L	A	E	A	F	W	I	D	I	K	R	M	D	D	P	E	C	Y	F	N	S	L	P	K	E	L	E	V	K	R	D	R	M	V	R	L	L	N	S	V	G
Template Known Secondary structure		S	S		G	G	G																					T	T	T																				T	T	T	T	S	T	T	S																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.															.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.		340	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.									.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.									.
Query Sequence		C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	A	V	F	K	S	L	W	D	Q	.	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	.	.	.	.	.	.	G	C	L	R	I	T	V	G	.	T	R	E	E	S	Q
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.									.
Alig confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.									.
Template Conservation		.
Template Sequence		.	L	K	P	I	V	P	D	G	G	Y	F	I	I	A	D	V	S	S	L	G	A	D	L	S	D	M	N	S	D	E	P	Y	D	Y	K	F	V	K	W	M	T	K	H	K	K	L	T	A	I	P	V	S	A	F	C	D	S	K	S	K	P	H	F	E	K	L	V	R	F	C	F	I	K	K	D	S	T	L	D
Template Known Secondary structure		.					B		S	B	S	S							T	T	S					T	T	T				S															S						G	G	G	G	S		T	T	T					T	T
Template Predicted Secondary structure		.
Template SS confidence
			363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		346	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	D	A	L	R	A	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	E	E	I	F	R	A	W	N
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions