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Job DescriptionP06986
Confidence100.00%DateThu Jan 5 10:59:42 GMT 2012
Rank19Aligned Residues346
% Identity16%Templatec3dzzB_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative pyridoxal 5'-phosphate-dependent c-s lyase; PDBTitle: crystal structure of a putative plp-dependent aminotransferase2 (lbul_1103) from lactobacillus delbrueckii subsp. at 1.61 a3 resolution
Resolution1.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50. ........60.........70..
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Query Sequence  STVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQT. . . . . . . LNRYPECQPKAVIENYAQYAG. .
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Template Sequence  KQYDFTHVPKRQGNSIK. . . . . WGVLKEKELPXWIAEXDFKIAPEIXASXEEKLKVAAFGYES. VPAEYYKAVADWEEIE
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   4.....10.........20 .........30.........40.........50.........60. ........70.......
 
   73......80.........90.........100.........110.........120.........130.. .......140...
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Query Sequence  . . . . VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDN. . . . . WQLDLQGISDK
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Template Sequence  HRARPKEDWCVFASGVVPAISAXVRQFTSPG. DQILVQEPVYNXFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLA
Template Known Secondary structure  S



GGGS
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   78.80.........90.........100........ .110.........120.........130.........140.........150......
 
   144.....150.........160.........170......... 180.........190..... ....200.........210........
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Query Sequence  LDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA. IVVADEAYIEFCPQAS. . . . LAGWLAEYPHLAILRTLSKAFAL
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Template Sequence  TPSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSTFNL
Template Known Secondary structure  STTSSBTTTTB


TT

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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   219220.........230.........240 .........250.........260.........270.........280..... ....290....
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Query Sequence  AGLRCGFTLANEEVINLLMKVI. . . APYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKE. IPCVEQVFD
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Template Sequence  AALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDS
Template Known Secondary structure  GGG



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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   295....300..... ....310....... ..320....... ..330.........340.... .....350....
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Query Sequence  SETNYILARFK. . . . ASSAVFKSLWDQ. GIILRDQNKQ. PSLSGCLRITVGTREES. . . . . QRVIDALRAE
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Template Sequence  NASYLAWVDISALGXNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGXQRLKQGVLNL
Template Known Secondary structure  SBSS
GGG
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GGGG
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   318.320.........330.........340.........350.........360.........370.........380........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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