Phyre 2 alignment of P06986 with c3dr4B

Job Description P06986
Confidence 99.91% Date Thu Jan 5 10:59:42 GMT 2012

Rank 147 Aligned Residues 300

% Identity 16% Template c3dr4B_

PDB info PDB header:transferase Chain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand

Resolution 1.60 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	.	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C
Query Conservation																																																			.
Alig confidence																													.	.																					.					.
Template Conservation																													.	.																										.
Template Sequence	E	C	M	D	T	T	W	I	S	S	V	G	R	F	I	V	E	F	E	K	A	F	A	D	Y	C	G	V	.	.	K	H	A	I	A	C	N	N	G	T	T	A	L	H	L	A	L	V	A	M	G	I	G	P	G	.	D	E	V	I	V	P	S	L	T	Y	I	A	S	A	N	S	V	T	Y	C	G	A	T	P
Template Known Secondary structure						T			S	S		S															T		.	.	S						S														T			T	T	.							S	S	S		T									T	T
Template Predicted Secondary structure																													.	.																										.
Template SS confidence
	24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

	125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P
Query Conservation
Alig confidence										.																																								.	.																							.	.
Template Conservation										.																																								.	.																							.	.
Template Sequence	V	L	V	D	N	D	P	R	T	.	F	N	L	D	A	A	K	L	E	A	L	I	T	P	R	T	K	A	I	M	P	V	H	L	Y	G	Q	I	C	D	M	D	P	I	L	E	V	A	R	.	.	R	H	N	L	L	V	I	E	D	A	A	E	A	V	G	A	T	Y	R	G	K	K	.	.	S	G	S	L	G
Template Known Secondary structure					B		T	T	T	.		S	B		G	G	G	T	G	G	G			T	T							B		G	G	G														.	.		T	T								T	T		T	T				T	T			.	.	T	T	S	S	S
Template Predicted Secondary structure										.																																								.	.																							.	.
Template SS confidence
	101	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.

	205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.												.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	.	.	.	.	.	.	.	.	.	.	.	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	C	A	T	F	S	F	F	G	N	A	I	I	T	T	G	E	G	G	M	I	T	T	N	D	D	D	L	A	A	K	M	R	L	L	R	G	Q	G	M	D	P	N	R	R	Y	W	F	P	I	V	G	F	N	Y	R	M	T	N	I	Q	A	A	I	G	L	A	Q	L	E	R	V	D	E	H	L	A	A	R	E
Template Known Secondary structure	S							B	T	T	S	S	S			B	S							S													B	T	T			T	T	S	T	T			S	S				B		B															T
Template Predicted Secondary structure
Template SS confidence
	176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

	274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.							.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																						.	.	.	.	.	.												.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.												.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	.	.	.	.	.	.	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.												.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.												.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	V	V	G	W	Y	E	Q	K	L	A	R	L	G	N	R	V	T	K	P	H	V	A	L	T	G	R	H	V	F	W	M	Y	T	V	R	L	G	E	G	L	S	T	T	R	D	Q	V	I	K	D	L	D	A	L	G	I	E	S	R	P	V	F	H	P	M	H	I	M	P	P	Y	A	H	L	A	T	D	D	L
Template Known Secondary structure										G	G	G	G	G	G	G								T	T	S					S	S							T	T		S	S												T	T	B									G	G	G	S	G	G	G	G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
	256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

								331	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.										.	.	.
Query SS confidence	.	.	.	.	.	.	.										.	.	.
Query Sequence	.	.	.	.	.	.	.	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation	.	.	.	.	.	.	.										.	.	.
Alig confidence	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence	K	I	A	E	A	C	G	V	D	G	L	N	L	P	T	H	A	G	L	T	E	A	D	I	D	R	V	I	A	A	L	D	Q
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
	336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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