Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 53 Aligned Residues 346 % Identity 16% Template c3dc1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kynurenine/alpha-aminoadipate aminotransferase PDBTitle: crystal structure of kynurenine aminotransferase ii complex with2 alpha-ketoglutarate Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																		.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		V	T	I	T	D	L	A	R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	T	Q	Q	T	L	N	R	Y	.	P	E	C	Q	P	K	A	V	I	E
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																			.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																			.	.	.	.	.
Template Sequence		M	N	Y	A	R	F	I	T	A	A	S	A	A	R	N	P	S	.	.	.	.	.	P	G	P	K	S	M	I	S	L	A	G	G	L	P	N	P	N	M	F	P	F	K	T	A	V	I	T	V	E	N	G	K	T	I	Q	F	G	E	E	M	M	K	R	A	L	Q	Y	S	P	S	A	G	I	P	E	L	L	S
Template Known Secondary structure					G	G	G	S											.	.	.	.	.				S	S											G	G	G		S									T	T	S														T	S				T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		66	.	.	.	70	.														.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	A	Q	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																																																	.
Template Sequence		W	L	K	Q	L	Q	I	K	L	H	N	P	P	T	I	H	Y	P	P	S	Q	G	Q	M	D	L	C	V	T	S	G	S	Q	Q	G	L	C	K	V	F	E	M	I	I	N	P	G	.	D	N	V	L	L	D	E	P	A	Y	S	G	T	L	Q	S	L	H	P	L	G	C	N	I	I	N	V	A	S	D	E	S
Template Known Secondary structure											T			T	T	T	T	S		G	G	G	T								S	S															T	T	.							S	S										G	G	G	T										T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.														150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.																															.																.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																															.																.
Query Sequence		W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	.	S	L	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.																															.																.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																															.																.
Template Conservation
Template Sequence		G	I	V	P	D	S	L	R	D	I	L	S	R	W	K	P	E	D	A	K	N	P	Q	K	N	T	P	K	F	L	Y	T	V	P	N	G	N	N	P	T	G	N	S	L	T	S	E	R	K	K	E	I	Y	E	L	A	R	K	Y	D	F	L	I	I	E	D	D	P	Y	Y	F	L	Q	F	N	K	F	R	V	P
Template Known Secondary structure													T	T	S		G	G	G	G	S		G	G	G				S							S	S		T	T	T																				T								T	T	T	T		B	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																																		.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.
Query Sequence		G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	.	.	.	.	.	.	I	V	A	M	R	E	R	V	A	Q
Query Conservation																																																																		.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	L	S	M	D	V	D	G	R	V	I	R	A	D	S	F	S	I	I	S	S	G	L	R	I	G	F	L	T	G	P	K	P	L	I	E	R	V	I	L	H	I	Q	V	S	T	L	H	P	S	T	F	N	Q	L	M	I	S	Q	L	L	H	E	W	G	E	E	G	F	M	A	H	V	D	R	V	I	D	F
Template Known Secondary structure			S	G	G	G		S	S	S													S	T	T																				T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																				.	.	.	.																							.	.	.	.													.	.
Query SS confidence																	.	.																				.	.	.	.																							.	.	.	.													.	.
Query Sequence		I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	.	.	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	.	.	.	.	P	S	L	S	G	C	L	R	I	T	V	G	.	.
Query Conservation																	.	.																				.	.	.	.																							.	.	.	.													.	.
Alig confidence																	.	.																				.	.	.	.																							.	.	.	.													.	.
Template Conservation
Template Sequence		Y	S	N	Q	K	D	A	I	L	A	A	A	D	K	W	L	T	G	L	A	E	W	H	V	P	A	A	G	M	F	L	W	I	K	V	K	G	I	N	D	V	K	E	L	I	E	E	K	A	V	K	M	G	V	L	M	L	P	G	N	A	F	Y	V	D	S	S	A	P	S	P	Y	L	R	A	S	F	S	S	A
Template Known Secondary structure																		B	T	T							S	B	S	S							T	T		S		S						T					T	T						G	G	G	G	S	S	S	T	T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	R	E	E	S	Q	R	V	I	D	A	L	.	R	A	E	Q
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		S	P	E	Q	M	D	V	A	F	Q	V	L	A	Q	L	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions