Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 56 Aligned Residues 301 % Identity 19% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		52	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.															.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure						.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	R	Y	.	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S
Query Conservation						.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																																																	.
Template Sequence		C	R	N	Y	G	G	L	L	G	I	A	D	I	R	E	L	W	A	E	A	L	G	L	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	.	V	K	W	L	C	P	V	P	G	Y	D	R	H	F	T	I
Template Known Secondary structure		T	T	S	S			S	S														T			G	G	G					S	S																			T	T		S	S		G	G	G	S	S		.								S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																										.	.																								.	.
Query SS confidence																																										.	.																								.	.
Query Sequence		A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	.	.	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	.	I	V	V	A	D	E	A	Y	I	E	F	C	P
Query Conservation																																										.	.																								.	.
Alig confidence																																										.	.																								.	.
Template Conservation
Template Sequence		T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	E	G	P	D	X	G	V	V	R	E	L	V	K	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L
Template Known Secondary structure					T	T										T	T											T	T	S	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		193	.	.	.	.									.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																																																																	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.																																																																	.	.	.
Query Sequence		Q	A	S	L	A	.	.	.	.	.	.	.	.	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	.	.	.
Query Conservation							.	.	.	.	.	.	.	.																																																																	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																																																																	.	.	.
Template Conservation
Template Sequence		S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F	X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	A	Q	F	F	G	D	V	A	G
Template Known Secondary structure		S	S																T		T	T								S	T	T	T	S		T	T	S	S																							S																S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
			262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.						.
Predicted Secondary structure		.																									.	.	.	.																					.	.																								.	.	.	.	.
Query SS confidence		.																									.	.	.	.																					.	.																								.	.	.	.	.
Query Sequence		.	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	.	.	.	.	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	.	.	.	.	.	S
Query Conservation		.																									.	.	.	.																					.	.																								.	.	.	.	.
Alig confidence		.																									.	.	.	.																					.	.																								.	.	.	.	.
Template Conservation
Template Sequence		L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	T	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P
Template Known Secondary structure																													G	G	G		S							S	B	S	S							S	T	T												T	T						T	T	T	T	S	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	S	G	C	L	R	I	T	V	G	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		N	N	E	N	I	R	L	A	P	S	L	P	P	V	A	E	L	E	V	A	X	D	G	F	A	T
Template Known Secondary structure		T	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions