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Job DescriptionP06986
Confidence100.00%DateThu Jan 5 10:59:42 GMT 2012
Rank56Aligned Residues301
% Identity19%Templatec3d6kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52... ....60.........70.........80.........90.... .....100.........110......
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Query Sequence  LNRY. PECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRA. . . . . . . . . . . . . . FCEPGKDAILYCPPTYGMYSVS
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Template Sequence  CRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIXFDLISWSYTWGNNDSSRPWSAEEK. VKWLCPVPGYDRHFTI
Template Known Secondary structure  TTSS

SS

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GGG
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   66...70.........80.........90.........100.........110.........120........ .130.........140....
 
   117..120.........130.........140.........150...... ...160.........170......... 180.........190..
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Query Sequence  AETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPN. . NPTGQLINPQDFRTLLELTRGKA. . IVVADEAYIEFCP
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Template Sequence  TEHFGFEXINVPXTDEGPDXGVVRELVKDPQVKGXWTVPVFGNPTGVTFSEQTCRELAEXSTAAPDFRIVWDNAYALHTL
Template Known Secondary structure  TT
TT
TTSTT

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TTT







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TTTT
BS
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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   193.... ..200.........210.........220.........230.........240.........250.........260.
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Query Sequence  QASLA. . . . . . . . GWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQG. . .
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Template Sequence  SDEFPIVHNVIEFAQAAGNPNRFWFXSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAG
Template Known Secondary structure  SS






T
TT
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   262.......270.........280..... ....290.........300..... ....310.........320........ .
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Query Sequence  . IVAMRERVAQIIAEREYLIAALKE. . . . IPCVEQVFDSETNYILARFK. . ASSAVFKSLWDQGIILRDQNKQP. . . . . S
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Template Sequence  LKAHXLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDP
Template Known Secondary structure  GGG
S


SBSS
STT
TT


TTTTSGGG

T
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   305....310.........320.........330.........340.........350.........360.........370.........380....
 
   330......... 340.........350...
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Query Sequence  LSGCLRITVG. . TREESQRVIDALRA
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Template Sequence  NNENIRLAPSLPPVAELEVAXDGFAT
Template Known Secondary structure  TS


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   385....390.........400.........410
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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