Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 67 Aligned Residues 298 % Identity 17% Template c2zy3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-aspartate beta-decarboxylase; PDBTitle: dodecameric l-aspartate beta-decarboxylase Resolution 2.50 Å

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		53	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure					.																		.	.	.	.	.	.	.	.	.																								.	.	.	.	.																						.
Query SS confidence					.																		.	.	.	.	.	.	.	.	.																								.	.	.	.	.																						.
Query Sequence		N	R	Y	.	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	.	.	.	.	.	.	.	.	.	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	.	.	.	.	.	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	.
Query Conservation					.																		.	.	.	.	.	.	.	.	.																								.	.	.	.	.																						.
Alig confidence					.																		.	.	.	.	.	.	.	.	.																								.	.	.	.	.					.																	.
Template Conservation																																																																.
Template Sequence		N	Y	P	V	P	P	R	M	L	N	I	S	E	K	I	V	R	Q	Y	I	I	R	E	M	G	A	D	A	I	P	S	E	S	V	N	L	F	A	V	E	G	G	T	A	A	M	A	Y	I	F	E	S	L	K	L	N	G	L	L	K	A	G	.	D	K	V	A	I	G	M	P	V	F	T	P	Y	I	E	I	P
Template Known Secondary structure		S			S	S	T	T																	T	T		T	T	S		G	G	G							S																T	T	S	S		T	T	.								S			T					S	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
			117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																		.	.	.																																															.	.	.
Query SS confidence		.																		.	.	.																																															.	.	.
Query Sequence		.	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	.	.	.	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	.	.	I	V	V	A	D	E	A	Y	I	E
Query Conservation		.																		.	.	.																																															.	.	.
Alig confidence		.																		.	.	.																																															.	.	.
Template Conservation
Template Sequence		E	L	A	Q	Y	A	L	E	E	V	A	I	N	A	D	P	S	L	N	W	Q	Y	P	D	S	E	L	D	K	L	K	D	P	A	I	K	I	F	F	C	V	N	P	S	N	P	P	S	V	K	M	D	Q	R	S	L	E	R	V	R	N	I	V	A	E	H	R	P	D	L	M	I	L	T	D	D	V	Y	G	T
Template Known Secondary structure		T	S	T	T	T										B	G	G	G	T	S	B							G	G	G	G		T	T								S	S		S	S	S		B																	T		T	T								T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		F	A	D	D	F	Q	S	L	F	A	.	I	C	P	E	N	T	L	L	V	Y	S	F	S	K	Y	F	G	A	T	G	W	R	L	G	V	V	A	A	H	Q	Q	N	V	F	D	L	A	L	D	K	L	Q	E	S	E	K	V	A	L	D	H	R	Y	R	S	L	L	P	D	V	R	S	L	K	F	I	D	R	L
Template Known Secondary structure		G	S	S	S							.			G	G	G							S	T	T	T	T	T		G	G	G									S	S									S	S												T	T	T	T		S		G	G	G
Template Predicted Secondary structure												.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
																								249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.															.
Template Conservation																																																																	.	.
Template Sequence		V	A	D	S	R	A	V	A	L	N	H	T	A	G	L	S	T	P	Q	Q	V	Q	M	A	L	F	S	L	F	A	L	M	D	E	A	D	E	Y	K	H	T	L	K	Q	L	I	R	R	R	E	T	T	L	Y	R	E	L	G	M	P	P	L	R	.	.	D	E	N	A	V	D	Y	Y	T	L	I	D	L	Q	D
Template Known Secondary structure					T	T	T	T	T	T	G	G	G		S	S																			T	T																			T	T	T	T	T	S					.	.		T	T	B			S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
																				306	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	.	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																							.	.
Template Conservation
Template Sequence		V	T	A	K	L	Y	G	E	A	F	S	E	W	A	V	K	Q	S	S	T	G	D	M	L	F	R	I	A	D	E	T	G	I	V	L	L	P	G	R	G	F	G	S	N	R	P	S	G	R	A	S	L	A	N	L	N	E	Y	E	Y	A	A	I	G	R	A	L	R	K	M
Template Known Secondary structure																																	S								S	S		T	T	S							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions