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Job DescriptionP06986
Confidence99.96%DateThu Jan 5 10:59:42 GMT 2012
Rank95Aligned Residues317
% Identity14%Templatec2z9wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of pyridoxamine-pyruvate aminotransferase complexed2 with pyridoxal
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60 .........70.........80.........90.........100
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Query Sequence  GNGDVWLNANEYPTAVEFQLTQQTLNRYPECQP. . . . . . . KAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGK
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Template Sequence  ADPVITLTAG. . PVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPD.
Template Known Secondary structure  S

S

SS..S



TTS



TTSTT
SS

SS
T

TT.
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   8.10....... ..20.........30.........40.........50.........60.........70.........80....
 
   101........110. ........120.........130.........140.........150.........160.........170........
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Query Sequence  DAILYCPPTYG. . MYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGK
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Template Sequence  DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAH
Template Known Secondary structure 

SS
S


TTS



TT

SGGGT

T
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   179 180.........190.........200.........210.........220.........230.........240.
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Query Sequence  A. IVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIA. . . . . . . . . . . . . . . .
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Template Sequence  GAYLIVDAVSSFGGMKTH. . . . PEDCKADIYVTGPNKCLG. APPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAW
Template Known Secondary structure  T

TTTBTTBS

....GGGTT
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S


T
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   165....170.........180.. .......190.........200 .........210.........220.........230.........
 
   242.......250.........260.........270.........280.........290...... ...300..... ....
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Query Sequence  . . . . . . PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSE. . . TNYILARFK. . . ASSA
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Template Sequence  SRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVDEKA
Template Known Secondary structure  STTS

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T

BSSSSGGGB
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   310....... ..320.........330........ .340.........350...
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Query Sequence  VFKSLWDQ. GIILRDQNKQPSLSGCLRITV. . . . GTREESQRVIDALRA
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Template Sequence  LRQAARARYGVVFSSGRGETL. GKLTRIGHMGPTAQPIYAIAALTALGG
Template Known Secondary structure 

B


GGGT.TT

GGG
S
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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