Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 59 Aligned Residues 335 % Identity 13% Template c2z61A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable aspartate aminotransferase 2; PDBTitle: crystal structure of mj0684 from methanococcus jannaschii2 reveals its similarity in the active site to kynurenine3 aminotransferases Resolution 2.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.								.
Query SS confidence																			.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.								.
Query Sequence		L	A	R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	.	.	.	.	.	.	.	.	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	.	.	.	.	.	.	.	L	N	R	Y	P	E	C	.	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G
Query Conservation																			.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.								.
Alig confidence																			.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		M	L	S	K	R	L	L	N	F	E	S	F	E	V	M	D	I	L	A	L	A	Q	K	L	E	S	E	G	K	K	V	I	H	L	E	I	G	E	P	D	F	N	T	P	K	P	I	V	D	E	G	I	K	S	L	K	E	G	K	T	H	Y	T	D	S	R	G	I	L	E	L	R	E	K	I	S	E	L	Y	K
Template Known Secondary structure														T	T													T	T										S		S	S																T	T			S				T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
								73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																												.																																	.	.	.	.	.	.
Template Conservation																																			.																																	.	.	.	.	.	.
Template Sequence		D	K	Y	K	A	D	I	I	P	D	N	I	I	I	T	G	G	S	S	L	G	L	F	F	A	L	S	S	I	I	D	D	G	.	D	E	V	L	I	Q	N	P	C	Y	P	C	Y	K	N	F	I	R	F	L	G	A	K	P	V	F	C	D	F	T	V	E	.	.	.	.	.	.	S	L	E	E	A	L	S	D
Template Known Secondary structure				S	S					G	G	G					S	S															T	T	.							S	S			T									T	T								S	S			.	.	.	.	.	.								S
Template Predicted Secondary structure																																			.																																	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	.	.	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G
Query Conservation																																																														.	.
Alig confidence																													.	.																																.	.
Template Conservation																													.	.
Template Sequence		K	T	K	A	I	I	I	N	S	P	S	N	P	L	G	E	V	I	D	R	E	I	Y	E	F	A	Y	.	.	E	N	I	P	Y	I	I	S	D	E	I	Y	N	G	L	V	Y	E	G	K	C	Y	S	A	I	E	F	D	E	N	L	E	K	T	I	L	I	N	G	F	S	L	Y	A	M	T	G	W	R	I	G
Template Known Secondary structure		S								S	S		T	T	T														.	.				S							T	T	T	T		B	S	S	S					G	G	G	T		T	T		S	S													G	G	G
Template Predicted Secondary structure																													.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	.	.	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A
Query Conservation																					.	.
Alig confidence																					.	.																																													.
Template Conservation																																																																			.
Template Sequence		Y	V	I	S	N	D	E	I	I	E	A	I	L	K	L	Q	Q	N	L	F	I	S	A	P	T	I	S	Q	Y	A	A	L	K	A	F	E	K	E	T	E	R	E	I	N	S	M	I	K	E	F	D	R	R	R	R	L	V	L	K	Y	V	K	D	F	G	.	W	E	V	N	N	P	I	G	A	Y	Y	V	F	P
Template Known Secondary structure																					T	S	S	S									G	G	G	G	S																												T	T	.		B						B	T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.
		303	.	.		.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure					.													.												.												.
Query SS confidence					.													.												.												.
Query Sequence		R	F	K	.	A	S	S	A	V	F	K	S	L	W	D	Q	.	G	I	I	L	R	D	Q	N	K	Q	P	.	S	L	S	G	C	L	R	I	T	V	G	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation					.													.												.												.
Alig confidence					.													.												.												.
Template Conservation
Template Sequence		N	I	G	E	D	G	R	E	F	A	Y	K	L	L	K	E	K	F	V	A	L	T	P	G	I	G	F	G	S	K	G	K	N	Y	I	R	I	S	Y	A	N	S	Y	E	N	I	K	E	G	L	E	R	I	K	E
Template Known Secondary structure		B		S	S																				G	G	G	G		G	G	G	S	S	B							S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions