Job Description P06986 Confidence 99.94% Date Thu Jan 5 10:59:42 GMT 2012 Rank 114 Aligned Residues 311 % Identity 14% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	.	.	.	.	.	.	.	L	N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																							.	.																					.				.
Template Conservation																																																	.	.																					.				.
Template Sequence		L	L	V	G	R	P	N	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	S	N	G	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	.	.	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	G	L	T	.	G	E	V	I	M	P
Template Known Secondary structure				T	T																					T			S	S	S																T	S	.	.	S						S														.	T			.	S
Template Predicted Secondary structure																																																	.	.																					.				.
Template SS confidence
		2021	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.			.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.		.	.	2090		.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A
Query Conservation
Alig confidence																												.																																									.	.
Template Conservation																												.																																									.	.
Template Sequence		S	M	T	F	A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	.	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	T	S	A	V	V	G	V	H	L	W	G	R	P	C	A	A	D	Q	L	R	K	V	A	D	.	.	E	H	G	L	R	L	Y	F	D	A	A
Template Known Secondary structure		S	S	S		T									T	T								B		T	T	.	T	S	S	B		S	T	T							T	T									G	G	G														.	.			T								T
Template Predicted Secondary structure																												.																																									.	.
Template SS confidence
		2097	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.		.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.			.	.	.	.	.	.	.	2170	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240										.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	.	.	.	.	.	.	.	.	.	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L
Query Conservation																																																								.	.	.	.	.	.	.	.	.
Alig confidence																.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		H	A	L	G	C	A	V	D	G	R	P	A	G	S	.	.	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	M	S	E	A	A	A	A	M
Template Known Secondary structure		T		T	T				T	T			T	T	S	.	.	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T			T	T				B		B
Template Predicted Secondary structure																.	.
Template SS confidence
		2174	.	.	.	.	.	2180	.	.	.	.	.	.	.			.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.									.	.	.	.
Query Sequence		S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	.	.	.	.	.	.	.	N	Y	I	L	A	R	F	K	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K
Query Conservation																																										.	.	.	.	.	.	.									.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S
Template Known Secondary structure																											T		S		T	T						G	G	G	G	S	B																S	S												T	T				B		T	T
Template Predicted Secondary structure
Template SS confidence
		2252	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.
		327	.	.																					330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		Q	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L
Template Known Secondary structure		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		2332	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions