Job Description P06986 Confidence 99.82% Date Thu Jan 5 10:59:42 GMT 2012 Rank 189 Aligned Residues 284 % Identity 16% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		L	N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	.	.	.	.	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V
Query Conservation																																																															.	.	.	.
Alig confidence																									.	.													.											.													.	.	.	.
Template Conservation																									.	.													.											.
Template Sequence		Y	S	R	S	G	N	P	T	R	N	C	L	E	K	A	V	A	A	L	D	G	A	K	.	.	Y	C	L	A	F	A	S	G	L	A	A	T	.	V	T	I	T	H	L	L	K	A	G	.	D	Q	I	I	C	M	D	D	V	Y	G	G	T	N	R	Y	F	R	Q	V	A	S	E	F	G	L	K	I	S	F	V
Template Known Secondary structure		B	G	G	G																T	T		S	.	.						S	S						.					T	T	S		T	T	.							S	S												T	G	G	G	T	T
Template Predicted Secondary structure																									.	.													.											.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L
Query Conservation																																																						.
Alig confidence					.	.	.	.																																.	.	.												.										.	.	.	.
Template Conservation					.	.	.	.																																.	.	.																						.	.	.	.
Template Sequence		D	C	S	.	.	.	.	K	I	K	L	L	E	A	A	I	T	P	E	T	K	L	V	W	I	E	T	P	T	N	P	T	Q	K	V	I	D	I	.	.	.	E	G	C	A	H	I	V	H	K	H	G	D	I	I	L	V	V	D	N	T	F	.	.	.	.	M	S	P	Y	F	Q	R	P	L	A	L	G	A	D
Template Known Secondary structure				S	.	.	.	.	S										T	T								S	S		T	T	T							.	.	.								T	T	S	S	S								T	T	.	.	.	.	T							T	T	T	T	T		S
Template Predicted Secondary structure					.	.	.	.																																.	.	.																						.	.	.	.
Template SS confidence
		136	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	.	.	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K
Query Conservation																	.	.
Alig confidence																	.	.																																									.	.	.
Template Conservation																																																											.	.	.
Template Sequence		I	S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	S	L	H	N	R	L	R	F	L	Q	N	S	L	G	A	V	P	S	P	I	D	C	Y	L	C	N	R	G	L	K	T	.	.	.	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V	A	Q	F	L	E
Template Known Secondary structure							T	T	T	T	T	T		S	S	S																																									T	T	.	.	.
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		285	.	.	.	.	290	.	.	.	.	.	.																		.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	P	C	V	E	Q	V	F	D	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	Y	I	L	A	R	F	K	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	P	W	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	C	T	G	M	V	T	F	Y	I	K	G	T	L	Q	H	A	E	I	F	L	K	N	L	K	L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M	T	H	A	S	V	L	K
Template Known Secondary structure		T		T	T							T	T	S	T	T	S	T	T									S	S			S							S	S													S	S	S				S			S	S	S	S						G	G	G	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
						326	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.															.	.	.
Query SS confidence		.	.	.	.															.	.	.
Query Sequence		.	.	.	.	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation		.	.	.	.															.	.	.
Alig confidence		.	.	.	.															.	.	.
Template Conservation
Template Sequence		N	D	R	D	V	L	G	I	S	D	T	L	I	R	L	S	V	G	L	E	D	E	E	D	L	L	E	D	L	D	Q	A	L	K	A
Template Known Secondary structure								T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions