Job Description P06986 Confidence 99.92% Date Thu Jan 5 10:59:42 GMT 2012 Rank 137 Aligned Residues 314 % Identity 12% Template c2fyfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60													.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	T	I	T	D	L	A	R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	K	A	V	I	E	N	Y	A	Q	Y
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	E	.	.	.	.	I	P	T	A	I	K	P	R	D	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	S	G	P	S	K	V	R	L	E	Q	L	Q	T	L	T	T	T	A	A	A	L	F	G	T	S	H	R	Q	A	P	V	K	N	L	V	G	R	V	R	S	G	L	A	E	L
Template Known Secondary structure					.	.	.	.			G	G	G	S		S			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S									G	G	G	G	T	T	T	G	G	G	T	T	S		T	T	S
Template Predicted Secondary structure					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10					.	.	.	.	.	.	.	.	.	20	.																.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		A	G	V	K	P	E	Q	.	.	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K
Query Conservation									.	.
Alig confidence									.	.																							.																																							.	.
Template Conservation																																	.																																							.	.
Template Sequence		F	S	L	P	D	G	Y	E	V	I	L	G	N	G	G	A	T	A	F	W	D	A	A	A	F	G	L	I	D	K	R	.	S	L	H	L	T	Y	G	E	F	S	A	K	F	A	S	A	V	S	K	N	P	F	V	G	E	P	I	I	I	T	S	D	P	G	S	A	P	E	.	.	P	Q	T	D	P	S	V	D
Template Known Secondary structure		T	T			T	T								T													T		S	S		.							S														T	T	S										T	T					.	.					T	T		S
Template Predicted Secondary structure																																	.																																							.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A
Query Conservation
Alig confidence																						.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		V	I	A	W	A	H	N	E	T	S	T	G	V	A	V	A	V	R	R	P	.	.	.	.	.	.	E	G	S	D	A	L	V	V	I	D	A	T	S	G	A	G	G	L	P	V	D	I	A	E	.	.	.	.	.	.	.	T	D	A	Y	Y	F	A	P	Q	K	N	F	A	S	D	G	G	L	W	L	A	I	M
Template Known Secondary structure							S			T	T	T	T									.	.	.	.	.	.	T	T										T	T	T	T	T	T	S				G	G	G	.	.	.	.	.	.	.		S						T	T	S	T	T		S		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	.	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		S	P	A	A	L	S	R	I	E	A	I	A	A	T	G	R	W	V	P	D	F	L	S	L	P	I	A	V	E	N	S	L	K	N	Q	T	Y	N	T	P	A	I	A	T	L	A	L	L	A	E	Q	I	D	W	L	V	G	N	G	G	L	D	W	A	V	K	R	T	A	D	S	S	Q	R	L	Y	S	W	A	Q
Template Known Secondary structure															T	T					G	G	G										T	T	T			S	S																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		285	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure													.	.	.	.											.	.	.																																			.	.	.
Query SS confidence													.	.	.	.											.	.	.																																			.	.	.
Query Sequence		E	I	P	C	V	E	Q	V	F	D	S	.	.	.	.	E	T	N	Y	I	L	A	R	F	K	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Query Conservation													.	.	.	.											.	.	.																																			.	.	.
Alig confidence													.	.	.	.											.	.	.																							.												.	.	.
Template Conservation																																																				.
Template Sequence		E	R	P	Y	T	T	P	F	V	T	D	P	G	L	R	S	Q	V	V	G	T	I	D	F	V	D	D	V	D	A	G	T	V	A	K	I	L	R	A	N	G	I	V	D	T	E	P	Y	R	K	.	L	G	R	N	Q	L	R	V	A	M	F	P	A	V	E	P	D	D	V	S	A	L	T	E	C	V	D
Template Known Secondary structure			S	T	T				S			S	G	G	G	B		S	S								T	T	S												T	T		B			S			T	T	.	T			S								T	T	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions