Job Description P06986 Confidence 99.87% Date Thu Jan 5 10:59:42 GMT 2012 Rank 172 Aligned Residues 284 % Identity 18% Template c2cb1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2. Resolution 2.0 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		L	N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	.	.	.	.	I	G	V	E	C	R	T	V
Query Conservation																																																																						.	.	.	.
Alig confidence																								.	.																									.																				.	.	.	.
Template Conservation																								.	.																									.
Template Sequence		Y	A	R	Q	K	D	P	T	A	K	A	L	E	E	R	L	K	A	L	E	G	A	.	.	L	E	A	V	V	L	A	S	G	Q	A	A	T	F	A	A	L	L	A	L	L	R	P	G	.	D	E	V	V	A	A	K	G	L	F	G	Q	T	I	G	L	F	G	Q	V	L	S	L	M	G	V	T	V	R	Y	V
Template Known Secondary structure		B	T	T	T																	T		.	.	S						S	S											T	T			T	T	.							T	T												T	T	T	T	T	T
Template Predicted Secondary structure																								.	.																									.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A
Query Conservation
Alig confidence					.	.	.	.	.																																							.	.																												.	.	.	.
Template Conservation					.	.	.	.	.																																							.	.																												.	.	.	.
Template Sequence		D	P	E	.	.	.	.	.	P	E	A	V	R	E	A	L	S	A	K	T	R	A	V	F	V	E	T	V	A	N	P	A	L	L	V	P	D	L	E	A	L	A	T	L	A	E	.	.	E	A	G	V	A	L	V	V	D	N	T	F	G	A	A	G	A	L	C	R	P	L	A	W	G	A	H	.	.	.	.	V
Template Known Secondary structure			S	S	.	.	.	.	.										T	T								S	S		T	T	T															.	.			T								G	G	G	T	T	T	T	S			G	G	G	G	T		S	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.																																							.	.																												.	.	.	.
Template SS confidence
		127	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																																																								.	.
Template Sequence		V	V	E	S	L	T	W	A	S	G	H	G	S	V	L	G	G	A	V	L	S	R	E	T	E	L	W	R	N	Y	P	Q	F	L	Q	P	W	E	A	L	R	A	R	C	F	P	E	R	V	R	T	L	G	L	S	L	C	G	M	A	L	S	P	F	N	A	Y	L	L	F	.	.	Q	G	L	E	T	V	A	L
Template Known Secondary structure										S		S	S													S	G	G	G	G	S	G	G	G	G							G	G	G											T	T	T	T														.	.			G	G	G
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Query Sequence		R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	E	T	N	Y	I	L	A	R	F	K	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.							.
Template Conservation																																																																									.	.
Template Sequence		R	V	A	R	M	S	E	T	A	R	F	L	A	E	R	L	Q	G	H	P	K	V	K	A	L	R	Y	P	G	L	P	E	D	P	A	H	R	N	A	R	K	Y	L	A	S	G	G	P	I	L	T	L	D	L	G	D	L	E	R	A	S	R	F	L	G	A	I	R	L	L	K	.	.	A	A	N	L	G	D	A
Template Known Secondary structure																			T		T	T		S					T	T	S	T	T		T	T									S	S	S		S							S	S												S	S			.	.		S			S		S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.
																											330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		R	T	L	L	V	H	P	W	T	T	T	H	S	R	L	K	E	E	A	R	L	Q	A	G	V	T	P	G	L	V	R	V	S	V	G	L	E	D	P	L	D	L	L	A	L	F	E	E	A	L	E	A
Template Known Secondary structure		S						T	T	T	T	T	T	T	T	S								T	T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions