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Job DescriptionP06986
Confidence65.88%DateThu Jan 5 10:59:42 GMT 2012
Rank240Aligned Residues113
% Identity9%Templatec1qbaA_
PDB info PDB header:glycosyl hydrolaseChain: A: PDB Molecule:chitobiase; PDBTitle: bacterial chitobiase, glycosyl hydrolase family 20
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90....... ..100. ........110. ........120...
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Query Sequence  AGVKPEQVLVSRGADEGIELLIRAFCE. . . PGKD. . . . . AILYCPPTYG. . . . . . . . . . . . . . . . . . . MYSVSAETIGVE
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Template Sequence  LKIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLN
Template Known Secondary structure 
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   291........300.........310.........320.........330.........340.........350.........360.........370
 
   124.....130.........140.........150. ........160.........170.........180...
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Query Sequence  CRTVPTLDNWQLDLQGISDKLDGVKVVY. . . . . . . . . . . . . . VCSPNNPTGQLINPQDFRTLLELTRGKAIVVA
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Template Sequence  KFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVI
Template Known Secondary structure 
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   371........380.........390.........400.........410.........420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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