Job Description P06986 Confidence 99.87% Date Thu Jan 5 10:59:42 GMT 2012 Rank 171 Aligned Residues 322 % Identity 12% Template c1oatB_ PDB info PDB header:aminotransferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase Resolution 2.50 Å

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		26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure														.	.								.											.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.								.											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	G	N	G	D	V	W	L	N	A	N	.	.	E	Y	P	T	A	V	E	.	F	Q	L	T	Q	Q	T	L	N	R	.	.	.	.	.	.	.	.	.	.	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I
Query Conservation														.	.								.											.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.								.											.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																														.	.
Template Sequence		V	E	G	R	K	Y	F	D	F	L	S	S	Y	S	A	V	N	Q	G	H	C	H	P	K	I	V	N	A	L	K	S	Q	V	D	K	L	T	L	T	S	R	A	F	Y	N	N	V	L	G	E	Y	E	E	Y	I	T	K	L	F	N	.	.	Y	H	K	V	L	P	M	N	T	G	V	E	A	G	E	T	A	C
Template Known Secondary structure		T	T							S	S					T		T	T		B	T													T	T		S				T	T	S			S	S													T	.	.		S						S	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		93	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	F	.	.	.	.	.	.	.	.	.	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	.	.	.	.	.	.	.	.	.	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S
Query Conservation					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D	L	P	A	L	E	R	A	L	Q	D	P	N	V	A	A	F	M	V	E
Template Known Secondary structure											T	T				T	T								T	T					S	S					T	T								T	T	S		S			S	S						T	T									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		155			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure			.	.																									.
Query SS confidence			.	.																									.
Query Sequence		P	.	.	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E
Query Conservation			.	.																									.
Alig confidence			.	.																									.																															.
Template Conservation																																																												.
Template Sequence		P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F	I	A	D	E	I	Q	T	G	L	A	R	T	G	R	W	L	A	V	D	Y	E	N	V	R	P	D	I	V	.	L	L	G	K	A	L	S	G	G	L	Y	P	V	S	A	V	L	C	D	D	D
Template Known Secondary structure		S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.				G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																										.																			.	.	.	.	.
Query SS confidence																																																										.																			.	.	.	.	.
Query Sequence		V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	.	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	.	.
Query Conservation																																																										.																			.	.	.	.	.
Alig confidence																																			.																							.																			.	.	.	.	.
Template Conservation																																			.
Template Sequence		I	M	L	T	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E	V	L	E	E	.	E	N	L	A	E	N	A	D	K	L	G	I	I	L	R	N	E	L	M	K	L	P	S	D	V	V	T	A	V	R	G	K	G	L	L	N	A	I	V	I	K	E	T	K	D	W
Template Known Secondary structure				T	T	S		T	T	S	S			S	S	T	T																		.	T	T																	T	T	S		T	T	T								T	T									B	T	T	B
Template Predicted Secondary structure																																			.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.
Predicted Secondary structure																																				.	.	.													.
Query SS confidence																																				.	.	.													.
Query Sequence		A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	.	R	A	E	Q	V
Query Conservation																																				.	.	.													.
Alig confidence																				.	.	.	.	.												.	.	.													.
Template Conservation																				.	.	.	.	.
Template Sequence		D	A	W	K	V	C	L	R	L	R	D	N	G	L	L	A	K	P	.	.	.	.	.	T	H	G	D	I	I	R	F	A	P	P	L	V	I	K	E	D	E	L	R	E	S	I	E	I	I	N	K	T	I	L	S
Template Known Secondary structure													T	T					B	.	.	.	.	.	S	S	S	S								T	T																			T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.						.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions