Return to main results Retrieve Phyre Job Id

Job DescriptionP06986
Confidence57.72%DateThu Jan 5 10:59:42 GMT 2012
Rank243Aligned Residues115
% Identity14%Templatec1m04A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: mutant streptomyces plicatus beta-hexosaminidase (d313n) in complex2 with product (glcnac)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90....... ..100.. .......110. ....
Predicted Secondary structure 





............



....



...................
Query SS confidence 


























. . . . . . . . . . . .




. . . .








. . . . . . . . . . . . . . . . . . .



Query Sequence  AGVKPEQVLVSRGADEGIELLIRAFCE. . . . . . . . . . . . PGKDA. . . . ILYCPPTYG. . . . . . . . . . . . . . . . . . . MYSV
Query Conservation         
  
 

  

         ............ 
 
 ....

   
 
 ...................    
Alig confidence 


























............




....








...................



Template Conservation 
 
    
 
 
 
  
 


 


 


               

   
 
 
 
  

 


  
       

  

Template Sequence  LDSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYID
Template Known Secondary structure  TTSSS
GGGG
SS









S
S
SSS


Template Predicted Secondary structure 




































Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   116...120.........130.........140.........150.........160.........170.........180......
Predicted Secondary structure 



































Query SS confidence 






































































Query Sequence  SAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEA
Query Conservation       
                                   

 
          
   
     




 
Alig confidence 























.













































Template Conservation   

  
 
 






    


 .   
 

  
            

  

 


 

  


 




Template Sequence  RVARYKYNKLHLHLSDDQGWRIAI. DSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPEI
Template Known Secondary structure  TTT


B
SS
B
B

.TTSTTTTS

TTSS



B
TT

Template Predicted Secondary structure 












.





















Template SS confidence 






































































   176...180.........190......... 200.........210.........220.........230.........240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions