Job Description P0A9T4 Confidence 25.37% Date Thu Jan 5 11:11:18 GMT 2012 Rank 77 Aligned Residues 194 % Identity 15% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	A	D	A	H	A	Q	L	D	Y	A	V	A	Q	G	I	N	L	I	D	V	A	E	M	Y	P	V	P	P	R	P	E	T	Q	G	L	T	E	T	Y	V	G	N	W	L	A	K	H	G	S	R	E	K	L	I	I	A	S	K	V	S	G	P	S	R	N	N	D	K	G	I	R	P	D	Q	A	L	D	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	.	.	.	.	.	.	.	.	.	.	R	G	G	A	Y	K	L	G	E	K	G	L	.	E	Y	L	R	E	A	A	D	K	Y	G	M	Y	V	V	T	E	A	L	G	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T					.	.	.	.	.	.	.	.	.	.							.						.										T	T									S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.													.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		K	N	I	R	E	A	L	H	D	S	L	K	R	L	Q	T	D	Y	L	D	L	Y	Q	V	H	W	P	Q	R	P	T	N	C	F	G	K	L	G	Y	S	W	T	D	S	A	P	A	V	S	L	L	D	T	L	D	A	L	A	E	Y	Q	R	A	G	K	I	R	Y	I	G	V	S	N	E	.	T	A	F	G	V
Query Conservation																																																																												.
Alig confidence		.	.	.	.	.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation		.	.	.	.	.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	D	L	P	K	V	A	E	.	.	.	.	.	Y	A	D	I	I	Q	I	G	A	R	N	A	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F
Template Known Secondary structure		.	.	.	.	.	G							.	.	.	.	.			S						G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G		S								T	T
Template Predicted Secondary structure		.	.	.	.	.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190																							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.																					240	.
Predicted Secondary structure																					.	.	.	.																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	Y	L	H	L	A	D	K	H	D	L	P	R	I	V	T	I	Q	.	.	.	.	N	P	Y	S	L	L	N	R	S	F	E	V	G	L	A	E	V	S	Q	Y	E	.	G	V	E	L	L	A	Y	S	C	L	G	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L
Query Conservation																					.	.	.	.																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	S	A	E	Y	I	A	N	S	G	N	T	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	S	A	V	P	I	I	R	K	E	S	H	L	P	I	L	V	D	P	S	H	S	G	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V
Template Known Secondary structure											T	T											B			S		S	S	S	S	S	B			T	T									B	S	S						T	T	T	T	T			G	G	G												T		S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	K	Y	L	N	G	A	K	P	A	G	A	R	N	T	L	F	S	R	F	T	R	Y	S	G	E	Q	T	Q	K	A	V	A	A	Y	V	D	I	A	R	R	H	G	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		E	V	H	P	E	P	E	K	A	L	S	D	G	K	Q	S	L	D	F	.	.	.	.	.	.	.	E	L	F	K	E	L	V	Q	E	M	K	K	L	A	D	A	L	G	V
Template Known Secondary structure			B		S		T	T	T		S	S	S	G	G	G		B			.	.	.	.	.	.	.																		T
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.								.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions