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Job DescriptionP0A9T4
Confidence100.00%DateThu Jan 5 11:11:18 GMT 2012
Rank6Aligned Residues311
% Identity26%Templatec3n2tA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the glycerol dehydrogenase akr11b4 from gluconobacter2 oxydans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.... .....30.........40.........50.........60.........70......
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Query Sequence  MQYHRIPHSSLEVSTLGLGTMTFG. . . . EQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH
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Template Sequence  SDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYG. . . . . . . FGHSEEIVGRALAE.
Template Known Secondary structure  TS

TT
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S
TTSS
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STTTT



TTGG.......GG.
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   3......10.........20.........30.........40.........50.........60 .........70....
 
   77..80.........90..... ....100.........110.........120.........130.........140.........150.....
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Query Sequence  GSREKLIIASKVSGPSRNN. DKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAV
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Template Sequence  . KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKT. . . . . . . . . . . . . . . . .
Template Known Secondary structure  .S




SSSTTT



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SSSS

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   75....80.........90.........100.........110.........120.........130......
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  SLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSC
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Template Sequence  PIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREV. . . . . . APLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGA
Template Known Secondary structure 
TTSS

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B
BTTB
GGGGTT
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   137..140.........150.........160.........170... ......180.........190.........200.........210
 
   236...240.........250.. .......260.........270.........280.........290.........300.........310....
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Query Sequence  LGFGTLTGKYLNGAKPA. GARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQ
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Template Sequence  LCRGLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQGPV. IALWGARKPGQ
Template Known Secondary structure  TGGGGGGT


TT



TTSGGGG
GGGSTTTT

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   211........220.........230.........240.........250.........260.........270........ .280.........
 
   315....320.........330.........340....
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Query Sequence  LKTNIESLHLELSEDVLAEIEAVHQVYTYP
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Template Sequence  VSGVKDVFGWSLTDEEKKAVDDILARHVPN
Template Known Secondary structure  GTTSS



S

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   290.........300.........310.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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