Job Description P0A9T4 Confidence 34.27% Date Thu Jan 5 11:11:18 GMT 2012 Rank 56 Aligned Residues 112 % Identity 16% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																		70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		Q	N	S	E	A	D	A	H	A	Q	L	D	Y	A	V	A	Q	G	I	N	L	I	D	V	A	E	M	Y	P	V	P	P	R	P	E	T	Q	G	L	T	E	T	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	W	L	A	K	.	H	G	S	R	E	K	L	I	I	A	S	K
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence																														.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	Q	P	E	Q	X	Q	K	L	V	A	E	X	K	A	N	G	F	K	A	I	C	T	P	F	D	E	.	.	.	.	.	.	.	.	.	.	E	S	V	D	L	I	E	A	H	G	I	E	I	I	K	I	A	S	C	S	F	T	D	W	P	L	L	E	R	I	A	R	S	D	K	P	V	V	A	S	T	A
Template Known Secondary structure																		T	T									S		.	.	.	.	.	.	.	.	.	.									T	T								S	S	S	T	T										T	S		S							T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	P	S	R	N	N	D	K	G	I	R	P	D	Q	A	L	D	R	K	N	I	R	E	A	L	H	D	S	L	K	R	L	Q	T	D	Y	L	D	L	Y	Q	V	H	W	P	Q	R	P	T	N	C	F	G	K	L	G	Y	S	W	T	D	S	A	P	A	V	S	L	L	D	T	L	D	A	L	A	E	Y
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.									.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.									.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	E	D	I	D	K	V	V	S	.	F	X	L	H	R	G	K	D	.	.	.	L	T	I	X	H	C	V	A	E	Y	P	T	P	D	D	H	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	I	K	T	L
Template Known Secondary structure		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.				T	T	T			.	.	.										S	S			G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.									.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.																	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	A	G	K	I	R	Y	I	G	V	S	N	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	Q	Y	A	G	V	R	I	G	Y	S	T	H	E
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions