Job Description P0A9T4 Confidence 40.54% Date Thu Jan 5 11:11:18 GMT 2012 Rank 50 Aligned Residues 124 % Identity 17% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		164	.	.	.	.	.	170		.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.													.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure									.									.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.									.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	E	Y	Q	R	A	.	G	K	I	R	Y	I	G	V	.	.	.	.	.	.	.	S	N	E	T	A	F	G	V	M	R	Y	L	H	L	A	D	K	H	D	L	P	R	I	V	T	I	Q	N	P	Y	S	L	L	N	R	.	.	.	.	.	.	.	.	.	.	.	.	S	F	E	V	G	L	A	E	V	S
Query Conservation									.									.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.									.	.	.	.	.	.	.																				.									.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.									.
Template Sequence		L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	Y	D	V	P	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	.	L	E	I	T	V	I	E	S	.	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I	R	N	V
Template Known Secondary structure							T	S	T	T										S	S		T	T	S																	T	T	.									.										T		T	T
Template Predicted Secondary structure																																												.									.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		224	.	.	.	.	.	230	.	.	.	.															.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Query Sequence		Q	Y	E	G	V	E	L	L	A	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	L	G	F	G	T	L	T	G	K	Y	L	N	G	A	K	P	A	G	A	R	N	T	L	F	S	R	F	T	R	Y	S	G	E	Q	T	Q	K	A	.	.	.	.	.	V	A	A	Y	V	D	I	A	R	R	H
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation
Template Sequence		G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A	E	E	A
Template Known Secondary structure					T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		285	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	K	M	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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