Job Description P0A9T4 Confidence 27.04% Date Thu Jan 5 11:11:18 GMT 2012 Rank 71 Aligned Residues 121 % Identity 16% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																		70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		Q	N	S	E	A	D	A	H	A	Q	L	D	Y	A	V	A	Q	G	I	N	L	I	D	V	A	E	M	Y	P	V	P	P	R	P	E	T	Q	G	L	T	E	T	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	W	L	A	K	.	H	G	S	R	E	K	L	I	I	A	S	K
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence																														.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	R	.	.	.	.	.	.	.	.	.	.	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G
Template Known Secondary structure																		T	T									S		.	.	.	.	.	.	.	.	.	.										T		S						G	G	G	T	T										T	T		S							T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.											.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	P	S	R	N	N	D	K	G	I	R	P	D	Q	A	L	D	R	K	N	I	R	E	A	L	H	D	S	L	K	R	L	Q	T	D	Y	L	D	L	Y	Q	V	H	W	P	Q	R	P	T	N	C	F	G	K	L	G	Y	S	W	T	D	S	A	P	A	V	S	L	L	D	T	L	D	A	L	A	E	Y
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	.	.	.	.	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	G	M	N	D	L
Template Known Secondary structure		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T		.	.	.	.											S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.																	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																.	.	.	.	.	200	.
		168	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		Q	R	A	.	.	G	K	I	R	Y	I	G	V	S	N	E	T	A	F	G	V	M	R	Y	L	H	L	A
Query Conservation					.	.
Alig confidence					.	.				.	.
Template Conservation										.	.
Template Sequence		S	E	A	F	P	D	A	I	.	.	I	G	L	S	D	H	T	L	D	N	Y	A	C	L	G	A	V	A
Template Known Secondary structure						T	T	S		.	.							S	S	S	S
Template Predicted Secondary structure										.	.
Template SS confidence
		202	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions