Job Description P0A9T4 Confidence 100.00% Date Thu Jan 5 11:11:18 GMT 2012 Rank 38 Aligned Residues 265 % Identity 25% Template c1vbjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin f synthase; PDBTitle: the crystal structure of prostaglandin f synthase from2 trypanosoma brucei Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		M	Q	Y	H	R	I	P	H	S	S	L	E	V	S	T	L	G	L	G	T	M	T	F	G	E	Q	N	S	E	A	D	A	H	A	Q	L	D	Y	A	V	A	Q	G	I	N	L	I	D	V	A	E	M	Y	P	V	P	P	R	P	E	T	Q	G	L	T	E	T	Y	V	G	N	W	L	A	K	.	H	G	S	R
Query Conservation																																																																													.
Alig confidence																										.	.	.																												.	.	.	.	.	.	.	.	.	.												.
Template Conservation																										.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	Q	S	L	K	L	S	N	G	V	M	M	P	V	L	G	F	G	M	W	K	L	Q	.	.	.	D	G	N	E	A	E	T	A	T	M	W	A	I	K	S	G	Y	R	H	I	D	T	A	A	I	Y	K	.	.	.	.	.	.	.	.	.	.	N	E	E	S	A	G	R	A	I	A	S	C	G	V	P	R
Template Known Secondary structure									T	T	S					S	B					T	T			.	.	.	T	T												T	T	T								G	G	G	T	.	.	.	.	.	.	.	.	.	.												S	S	S		G
Template Predicted Secondary structure																										.	.	.																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	I	I	A	S	K	V	S	G	P	S	R	N	N	D	K	G	I	R	P	D	Q	A	L	D	R	K	N	I	R	E	A	L	H	D	S	L	K	R	L	Q	T	D	Y	L	D	L	Y	Q	V	H	W	P	Q	R	P	T	N	C	F	G	K	L	G	Y	S	W	T	D	S	A	P	A	V	S	L	L	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	L	F	V	T	T	K	L	W	.	.	.	.	.	.	.	.	.	.	.	.	N	S	D	Q	G	Y	E	S	T	L	S	A	F	E	K	S	I	K	K	L	G	L	E	Y	V	D	L	Y	L	I	H	W	P	G	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	I	D
Template Known Secondary structure		G	G									.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S															T	T		S								S			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																			.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	A	L	A	E	Y	Q	R	A	G	K	I	R	Y	I	G	V	S	N	E	T	A	F	G	V	M	R	Y	L	H	L	A	D	K	H	D	L	P	R	I	V	T	I	Q	N	P	Y	S	L	L	N	R	S	F	E	V	G	L	A	E	V	S	Q	Y	E	G	V	E	L	L	A	Y	S	C	L	G	F	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		T	W	K	A	F	E	K	L	Y	A	D	K	K	V	R	A	I	G	V	S	N	F	H	E	H	H	I	E	E	L	L	K	H	.	.	.	.	.	.	C	K	V	A	P	M	V	N	Q	I	E	L	H	P	L	L	N	Q	K	A	L	C	E	Y	C	K	S	K	N	I	A	V	T	A	W	S	P	L	G	Q	G
Template Known Secondary structure												T	T	S								S										T	T	S	.	.	.	.	.	.		S	S										B	T	T	B												T	T							S	T	T	G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	G	K	Y	L	N	G	A	K	P	A	G	A	R	N	T	L	F	S	R	F	T	R	Y	S	G	E	Q	T	Q	K	A	V	A	A	Y	V	D	I	A	R	R	H	G	L	D	P	A	Q	M	A	L	A	F	V	R	R	Q	P	F	V	A	S	T	L	L	G	A	T	T	M	D	Q	L	K	T	N	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		H	L	V	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	L	K	A	I	G	G	K	Y	G	K	T	A	A	Q	V	M	L	R	W	E	I	Q	A	G	V	I	.	.	T	I	P	K	S	G	N	E	A	R	I	K	E	N	G
Template Known Secondary structure		T	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T														T	T			.	.						S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		194	.	.	.	.																															.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		E	S	L	H	L	E	L	S	E	D	V	L	A	E	I	E	A	V	H	Q	V	Y	T	Y	.	P	A	P
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		N	I	F	D	F	E	L	T	A	E	D	I	Q	V	I	D	G	M	N	A	G	H	R	Y	G	P	D	P
Template Known Secondary structure				S	S													T	T						S	S			T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions