 |
Job Description | P76164 | Confidence | 2.60% | Date | Thu Jan 5 12:19:59 GMT 2012 |
Rank | 11 | Aligned Residues | 25 |
% Identity | 24% | Template | c1xyr3_ |
PDB info |
PDB header:virus | Chain: 3: PDB Molecule:genome polyprotein, coat protein vp3; | PDB Fragment:residues 620-630
PDBTitle: poliovirus 135s cell entry intermediate
|
Resolution | 11.00 Å |
|
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | I | P | I | K | K | I | E | T | K | I | D | S | V | E | C | I | S | I | H | R | V | D | S |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | M | I | P | F | D | L | S | A | T | K | K | N | T | M | E | M | Y | R | V | R | L | S | D | K |
Template Known Secondary structure |   |
 |  |  |
|
|
|
|
| T | T | T | T | T | S | T | T | S | S |
|  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|