Job Description P0A9E9 Confidence 92.55% Date Thu Jan 5 11:10:01 GMT 2012 Rank 210 Aligned Residues 83 % Identity 13% Template d2b0la1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CodY HTH domain Resolution 2.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		Y	R	N	I	V	S	L	T	Q	N	Q	S	F	P	L	V	N	R	L	A	A	F	I	L	L	S	Q	E	G	D	L	Y	H	E	K	H	T	Q	A	A	E	Y	L	G	V	S	Y	R	H	L	L	Y	V	L	A	Q	F	I	H	D	G	L	L	I	.	.	.	.	.	K	S	K	K	G	Y	L	I	K	N	R
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.
Template Conservation
Template Sequence		S	K	A	V	V	Q	M	A	I	S	S	L	S	Y	S	E	L	E	A	I	E	H	I	F	E	E	L	D	G	N	E	G	L	L	V	A	S	K	I	A	D	R	V	G	I	T	R	S	V	I	V	N	A	L	R	K	L	E	S	A	G	V	I	E	S	R	S	L	G	M	K	G	T	Y	I	K	V	L	N	N
Template Known Secondary structure												T	S												T	T	S	S	B	T	T														T																T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	L	S	G	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	L	I	E	L	E	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions