Job Description P0A9E9 Confidence 89.36% Date Thu Jan 5 11:10:01 GMT 2012 Rank 221 Aligned Residues 45 % Identity 22% Template d1ttya_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		H	E	K	H	T	Q	A	A	E	Y	L	G	V	S	Y	R	H	L	L	.	.	.	.	Y	V	L	A	Q	F	I	H	D	G	L	L	I	K	S	K	K	G	Y	L	I	K	N	R	K	Q	L	S	G	L	A	L	E	M	D	P	E	N
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	T	L	E	E	V	G	Q	Y	F	N	V	T	R	E	R	I	R	Q	I	E	V	K	A	L	R	K	L	R	H	P	S	.	.	.	.	.	.	.	.	.	.	.	.	R	S	K	Y	L	K	S	L	L	S	L	M	D	E	N	E
Template Known Secondary structure													T																		B	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	S	S										T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.													.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions