Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9E9
Confidence95.19%DateThu Jan 5 11:10:01 GMT 2012
Rank178Aligned Residues70
% Identity13%Templated1stza1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Heat-inducible transcription repressor HrcA, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160...... ...170.........180.........190.. .......200........
Predicted Secondary structure 








..







.


Query SS confidence 



























. .

























.















Query Sequence  VNRLAAFILLSQEGDLYHEKHTQAAEYL. . GVSYRHLLYVLAQFIHDGLLIKSKKG. YLIKNRKQLSGLALEM
Query Conservation    

   
               

  
..
 

 

 
 
  
   


      .
 
 
   
   
   
Alig confidence 



























..

























.















Template Conservation 
  

  
       
 


  



     

  


  
  

  
 
 
 
 
 




  
   
    
Template Sequence  QRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEM
Template Known Secondary structure 
S
B
S


S
TTS

SS
S
B
Template Predicted Secondary structure 





















Template SS confidence 








































































   1920.........30.........40.........50.........60.........70.........80.........90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions