 |
| Job Description | P0A9E9 | | Confidence | 46.51% | Date | Thu Jan 5 11:10:01 GMT 2012 |
| Rank | 443 | Aligned Residues | 28 |
| % Identity | 14% | Template | d1rp3a2 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
| Resolution | 2.30 |
|
| | |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | | | | | |
|
|
| | | | | | | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
H | E | K | H | T | Q | A | A | E | Y | L | G | V | S | Y | R | H | L | L | Y | V | L | A | Q | F | I | H | D |
| Query Conservation | |
| | | | | |
|
| | |
|
| |
|
| |
|
| |
| |
| | |
| | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| | |
|
|
| | |
| |
|
| | |
|
| | | | | |
|
| | | |
| Template Sequence | |
E | L | P | A | K | E | V | A | K | I | L | E | T | S | V | S | R | V | S | Q | L | K | A | K | A | L | E | R |
| Template Known Secondary structure | |
|
|
| | | | | | | | T | T | S |
| | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | |
|
|
| | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
