 |
Job Description | P0A9E9 | Confidence | 60.96% | Date | Thu Jan 5 11:10:01 GMT 2012 |
Rank | 386 | Aligned Residues | 36 |
% Identity | 14% | Template | d1qzza1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Plant O-methyltransferase, N-terminal domain
|
Resolution | 2.10 |
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | E | K | H | T | Q | A | A | E | Y | L | G | V | S | Y | R | H | L | L | Y | V | L | A | Q | F | I | H | D | G | L | L | I | K | S | K | K |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
A | D | T | L | A | G | L | A | D | R | T | D | T | H | P | Q | A | L | S | R | L | V | R | H | L | T | V | V | G | V | L | E | G | G | E | K |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|