Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9E9
Confidence55.36%DateThu Jan 5 11:10:01 GMT 2012
Rank408Aligned Residues55
% Identity15%Templated1p6ra_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190
Predicted Secondary structure 


















Query SS confidence 























































Query Sequence  SFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK
Query Conservation        

   
               

  

 

 

 
 
  
   


    
Alig confidence 
















.





































Template Conservation 

  
  

  

    . 
  

   
        


 
 
 

  

 
    
Template Sequence  ISDAELEVMKVIWKHSS. INTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHK
Template Known Secondary structure 

TSSS.S


TTS
Template Predicted Secondary structure 




.











Template SS confidence 























































   7..10.........20... ......30.........40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions